DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6073 and hgh1

DIOPT Version :9

Sequence 1:NP_001247313.1 Gene:CG6073 / 43180 FlyBaseID:FBgn0039417 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_001007916.1 Gene:hgh1 / 493297 XenbaseID:XB-GENE-997807 Length:359 Species:Xenopus tropicalis


Alignment Length:356 Identity:130/356 - (36%)
Similarity:196/356 - (55%) Gaps:17/356 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ELVQFMQPNQRLDLKAVALTHVLGLTGSSEGKSAILSLDEMLMAIFGLTFDANQTVAKDAVLSLI 70
            ||:.|::|..|.|::|.||.::||::||.||:.::.:...:|.|:..|:.:.:..||:||...|:
 Frog     8 ELLSFLKPETRADVRAQALEYILGVSGSPEGRQSLCAEPRLLCALLDLSTEQSPHVAQDAHHVLV 72

  Fly    71 NLTSEEEAAIKVFQLAKQLQPPFAIVEVAAKEITNEQSDLADPWSMVLSNLTRVESLVHEILDTL 135
            ||||:..|...:......|.|..      ...:.:.....||.....|.||:|.|......|.:|
 Frog    73 NLTSDCAAHRALLAHVPTLLPSM------LSRLRDPGCPFADSICTALCNLSREEETCQSFLRSL 131

  Fly   136 ERDDHTLPRLAKAFAQLDYNKKKAKLHYLAPIFCNLTQVSRGRELCCHRKYELLEKLLPFASFEG 200
            .::.  :.:|........|| .:|.|.||.|:.|||||:..||.....|...::::|||:.. .|
 Frog   132 TQEG--MCQLLDMLCAPKYN-PRASLDYLGPLLCNLTQLPEGRHFILDRNRCVVQRLLPYLQ-SG 192

  Fly   201 SVVRRGGTIGILKNVCFDTVYHDVILNEQSSILVAILQPLCGPEEFSDEDNELLPIELQYLPESK 265
            |.|||||.:|.|:|.||....|..:|.:...:|..:|.||.|.|||::|:.|.||.:||||.|.|
 Frog   193 STVRRGGIVGTLRNCCFSHRDHAWLLGDDVDLLPFLLLPLAGGEEFTEEEMETLPPDLQYLAEDK 257

  Fly   266 TREEDPDLRKMLLECLLQLCSTRRSREILRSRGVYEILREYHKWEAKVGKDSDCL-LACENVVDI 329
            .||.|||:||||:|.:|.||:|...|.:::.||.|.::||.|.||.:     .|: .|||.::.:
 Frog   258 QREADPDIRKMLIETVLLLCATADGRRLVKQRGTYLVMRELHSWERE-----PCVKRACEKLIQM 317

  Fly   330 LIKKEEEIGLDNYKTEVEVPAEQSEKFVQED 360
            ||.:|.|.||:|. .||.||.:..|...:.|
 Frog   318 LIGEEPEAGLENL-LEVTVPPDLEETLSRLD 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6073NP_001247313.1 DUF383 103..275 CDD:281984 65/171 (38%)
DUF384 280..337 CDD:281985 20/57 (35%)
hgh1NP_001007916.1 DUF383 98..267 CDD:367793 65/172 (38%)
DUF384 272..324 CDD:367794 20/56 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 114 1.000 Domainoid score I6007
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H48742
Inparanoid 1 1.050 213 1.000 Inparanoid score I3537
OMA 1 1.010 - - QHG54604
OrthoDB 1 1.010 - - D1094436at2759
OrthoFinder 1 1.000 - - FOG0004316
OrthoInspector 1 1.000 - - otm49230
Panther 1 1.100 - - LDO PTHR13387
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R426
SonicParanoid 1 1.000 - - X3587
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

Return to query results.
Submit another query.