DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6142 and AT1G03990

DIOPT Version :10

Sequence 1:NP_651466.1 Gene:CG6142 / 43178 FlyBaseID:FBgn0039415 Length:616 Species:Drosophila melanogaster
Sequence 2:NP_171895.2 Gene:AT1G03990 / 839342 AraportID:AT1G03990 Length:758 Species:Arabidopsis thaliana


Alignment Length:645 Identity:122/645 - (18%)
Similarity:215/645 - (33%) Gaps:203/645 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 NRIPDTTRFLPEYDFIIVGAGSAGCVMANRLSEISSASVLLLEAGDQETFISDVPLTAALTQMTR 100
            :|..||.:.  |.|.::||:|..|.|.|..|:: |...|:::|.|:                   
plant   236 DRERDTYKI--ECDAVVVGSGCGGGVAAAILAK-SGLRVVVIEKGN------------------- 278

  Fly   101 YNWGYKAEPTEHACQG--------------LKGGVCNWPKGRGVGGTSLINFMLYTRGHRRDYDE 151
                |.|.....|.:|              ...|...:..|..|||.|::|:....:......:|
plant   279 ----YFAPRDYSALEGPSMFELFESNSLMMTHDGRFRFMAGSTVGGGSVVNWAASLKTPDAIIEE 339

  Fly   152 WAAANN----SGWSYDELLPYFRKSERIGIPELYKSPYHGRNGQLDVQYTDYRSQLLKAFLKSGR 212
            |:....    |...|...:....|  |:|:.|...     |.|        :::|:|:   |...
plant   340 WSVHRGISIYSSEKYKAAMGIVCK--RLGVTEKII-----REG--------FQNQILR---KGCE 386

  Fly   213 EMGYEIT----DPNGEHLMGFARSQATIRNGRRCSTSKAFIQPVVNRKNLHISMKSWVTRLII-- 271
            ::|.::|    :...:|..|.......  .|.:..|...::...|| .|..|..:....:||:  
plant   387 KLGLDVTIVPRNSTEKHYCGSCSYGCP--TGEKRGTDSTWLVDAVN-NNAVILTQCKAEKLILAD 448

  Fly   272 --------DPITKTATGVEFV---KQRQRYVVRARKEVILSAGTIASPQLLMLSGIGPAEHLREH 325
                    ....|...||...   :.|::..:.| |..|::.|::.:|.||..||      |:..
plant   449 NDANKREESGRRKRCLGVAASLSHQTRKKLQINA-KVTIVACGSLKTPGLLASSG------LKNS 506

  Fly   326 NIT-------VMQDLPVGYNLQDHITLNGLVF---VVN--------DSTVNDARLLNPSDIFRYI 372
            ||:       :|  :..||..:.:..|.|...   :|.        |||..:..|..|: |....
plant   507 NISRGLHIHPIM--MAWGYFPEKNSELEGAAHEGEIVTSLHYVHPMDSTTPNITLETPA-IGPGT 568

  Fly   373 FAGQGPYTIPGGAEAFAFVRTPSSKFAKDYPDMELVL--GAGSLSGDRFGTMRNLLGITDEFYDY 435
            ||...|:.  .|::    ::...:|:|:......:|.  |.|.:.||                  
plant   569 FAALTPWV--SGSD----MKERMAKYARTAHIFAMVRDEGVGEVKGD------------------ 609

  Fly   436 MFGDLQSKETFGLVPVLLRPKSRGRISLRSRNPFHWPRMEPNFMQHPDDVRAMIEGIEMILKLSR 500
                        :|...|.......:::                           |::..|::..
plant   610 ------------IVKYRLTKADEENLTI---------------------------GLKQALRILV 635

  Fly   501 SKPMAKMGTRFHDRPFPGCENLK-----------------FASEAYWKCCLRRYGSSLQHQSGTC 548
            :...|::||...|.....|:.:|                 .:...:|.      .|...||.|.|
plant   636 AAGAAEVGTYRSDGQRMKCDGIKQKDLEAFLDTVNAPPGVVSMSKHWT------QSFTAHQIGCC 694

  Fly   549 KMGPATDNTSVVDAQLRIHGIRGLRVVDASVLPNV----PAGHTNAIVIMVAEKAGDMIK 604
            :|| ||:....:|.:........|.|.||||||..    |.....:....::.:..:::|
plant   695 RMG-ATEKEGAIDGKGESWEAEDLYVCDASVLPTALGVNPMITVQSTAYCISNRIAELMK 753

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6142NP_651466.1 BetA 45..610 CDD:441878 119/636 (19%)
AT1G03990NP_171895.2 GMC_oxred_N 293..517 CDD:366272 48/251 (19%)
GMC_oxred_C 611..744 CDD:398739 30/166 (18%)

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