DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6142 and CG12398

DIOPT Version :10

Sequence 1:NP_651466.1 Gene:CG6142 / 43178 FlyBaseID:FBgn0039415 Length:616 Species:Drosophila melanogaster
Sequence 2:NP_572985.1 Gene:CG12398 / 32422 FlyBaseID:FBgn0030596 Length:633 Species:Drosophila melanogaster


Alignment Length:580 Identity:226/580 - (38%)
Similarity:344/580 - (59%) Gaps:30/580 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 YDFIIVGAGSAGCVMANRLSEISSASVLLLEAGDQETFISDVPLTAALTQMTRYNWGYKAEPTEH 112
            ||||::|.||||||:|.||||....||||||||..|..:.|:|....:.|.:.::|.|..||::.
  Fly    57 YDFIVIGGGSAGCVLAARLSENPEWSVLLLEAGGDEPLLIDLPQLYPVFQRSPWDWKYLTEPSDR 121

  Fly   113 ACQGLKGGVCNWPKGRGVGGTSLINFMLYTRGHRRDYDEWAAANNSGWSYDELLPYFRKSERIGI 177
            .|..::...|.||:.:.:||.|.||.|:|.||:|||||:|||..|.||:||.:|.||||.|.:.:
  Fly   122 YCLAMEDQRCFWPRAKVLGGCSSINAMMYIRGNRRDYDQWAALGNPGWNYDNILHYFRKLEDMRV 186

  Fly   178 PELYKSPYHGRNGQLDVQYTDYRSQLLKAFLKSGREMG--YEITDPNGEHLMGFARSQATIRNGR 240
            |....|||||..|.:.|:...:.|.||..|:::.:::|  :...|.||....|||....::|:|.
  Fly   187 PGFEHSPYHGHGGPISVERYRFPSPLLDIFMRAAQQLGMVHPDGDFNGRSQTGFAPPHGSLRDGL 251

  Fly   241 RCSTSKAFIQPVVNRKNLHISMKSWVTRLIIDPITKTATGVEFVKQRQRYVVRARKEVILSAGTI 305
            |||.:|.:|:....|.||.|.:|::|.|::|||.:..|.||.|.....::.|||::|||||||::
  Fly   252 RCSANKGYIRRSWQRPNLDIVLKAFVERIVIDPQSHRAIGVIFEYGLLKHTVRAKREVILSAGSL 316

  Fly   306 ASPQLLMLSGIGPAEHLREHNITVMQDLP-VGYNLQDHITLNGLVF----------------VVN 353
            |||||||:||:||.:.|....|.|:|.|| ||.||||||:.:|.::                ::|
  Fly   317 ASPQLLMVSGVGPRDQLEPQGIPVVQHLPGVGGNLQDHISTSGAIYTFDSGQNRHLSFIVPEMMN 381

  Fly   354 DSTVNDARLLNPSDIFRYIFAGQGPYTIPGGAEAFAFVRTPSSKFAKDYPDMELVLGAGSLSGDR 418
            :..|.|  .:..||.|.        |.:| .:|...|..|.......|:||:::.:|:.....|.
  Fly   382 EQAVED--FVQGSDSFF--------YAMP-VSEVMGFFSTRYQDPRLDWPDVQIFMGSYGYGADG 435

  Fly   419 FGTMRNLLGITDEFYDYMFGDLQSKETFGLVPVLLRPKSRGRISLRSRNPFHWPRMEPNFMQHPD 483
            ....|....||.:.|...|..:..:::|.:.|:|:||:|||.:.|||.:|...|.:..|:...|.
  Fly   436 GMIGRRGAAITLDNYAEAFEPVLYQDSFVIAPLLMRPRSRGYLQLRSADPKVHPLIHANYYDDPH 500

  Fly   484 DVRAMIEGIEMILKLSRSKPMAKMGTRFHDRPFPGCENLKFASEAYWKCCLRRYGSSLQHQSGTC 548
            |:..|:||:::..:|:::..|..:....:...:..|..:::.|:|:|:|..|.|..::.|..|||
  Fly   501 DMAVMVEGLKLAHRLTQTPVMQSLNATMNIYEWRNCPEVEYLSDAFWECLARFYSQTIYHPVGTC 565

  Fly   549 KMGPATDNTSVVDAQLRIHGIRGLRVVDASVLPNVPAGHTNAIVIMVAEKAGDMIKDAWR 608
            ||.||:|...|||.:||:.|:|||||:|||::|.:|.|:|||..:|:||:..|:||:.||
  Fly   566 KMAPASDPAGVVDPRLRVRGMRGLRVIDASIMPTIPTGNTNAPTLMLAERGADIIKEDWR 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6142NP_651466.1 BetA 45..610 CDD:441878 226/580 (39%)
CG12398NP_572985.1 BetA 54..626 CDD:441878 226/580 (39%)

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