Protein Alignment CG6142 and Chdh

DIOPT Version :10

• Sequence 1: NP_651466.1
• Gene: CG6142 / 43178
• FlyBaseID: FBgn0039415
• Length: 616
• Species: Drosophila melanogaster
• Sequence 2: NP_942026.1
• Gene: Chdh / 290551
• RGDID: 735166
• Length: 599
• Species: Rattus norvegicus
• Alignment Length: 579
• Identity: 205/579 - (35%)
• Similarity: 296/579 - (51%)
• Gaps: 67/579 - (11%)

  Fly    47 EYDFIIVGAGSAGCVMANRLSEISSASVLLLEAGDQETFISD------VPLTAALTQM---TRYN 102
            ||.||:|||||||||:||||:|..:..|||||||.::..:..      :.:.|||...   .:||
  Rat    45 EYTFIVVGAGSAGCVLANRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVANLCDDKYN 109

  Fly   103 WGYKAEPTEHACQGLKGGVCNWPKGRGVGGTSLINFMLYTRGHRRDYDEWAAANNSGWSYDELLP 167
            |.|..|    |..||.|.|..||:||..||:|.:|.|:|.|||..||:.|......||.|...||
  Rat   110 WYYHTE----AQPGLDGRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHRQGAEGWDYAHCLP 170

  Fly   168 YFRKSERIGIPELYKSPYHGRNGQLDVQYTDYRSQLLKAFLKSGREMGYEIT-DPNGEHLMGFAR 231
            ||||:::   .||..:.|.|.:|.|.|........|.:|||::.|:.||..| |.||....||..
  Rat   171 YFRKAQK---HELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTEDMNGFQQEGFGW 232

  Fly   232 SQATIRNGRRCSTSKAFIQPVVNRKNLHISMKSWVTRLIIDPITKTATGVEFVKQRQRYVVRARK 296
            ...||..|:|.||:.|:::|.::|.||...:::.|:|::.:  ...|.|||::|..|.:.....:
  Rat   233 MDMTIHQGKRWSTASAYLRPALSRPNLRAEVQTLVSRVLFE--GTRAVGVEYIKDGQSHKAYVSR 295

  Fly   297 EVILSAGTIASPQLLMLSGIGPAEHLREHNITVMQDLP-VGYNLQDHITLNGLVFVVNDSTVNDA 360
            |||||.|.|.|||||||||:|.|:.|::..|.|:..|| ||.|||||:.:..........|::.|
  Rat   296 EVILSGGAINSPQLLMLSGVGNADDLKKLGIPVVCHLPGVGQNLQDHLEIYIQHACTQPITLHSA 360

  Fly   361 R------LLNPSDIFRYIFAGQGPYTIPGGAEAFAFVRTPSSKFAKDYPDMEL-VLGAGSLSGDR 418
            :      .:....::|:...|...:...||     |:|   |:....:||::. .|.:..:...|
  Rat   361 QKPLRKVCIGLEWLWRFTGDGATAHLETGG-----FIR---SRPGVPHPDIQFHFLPSQVIDHGR 417

  Fly   419 FGTMRNLLGITDEFYDYMFGDLQSKETFGLVPVLLRPKSRGRISLRSRNPFHWPRMEPNFMQHPD 483
            ..|.:       |.|....|             .:|..|.|.:.|||.||...|.:.||::....
  Rat   418 KPTQQ-------EAYQVHVG-------------TMRATSVGWLKLRSTNPQDHPMINPNYLSTET 462

  Fly   484 DVRAMIEGIEMILKLSRSKPMAKMGTRFHDRPFPGCE---NLKFASEAYWKCCLRRYGSSLQHQS 545
            ||....:.:::..::...:..|         ||.|.|   .....|:......:|....|..|.|
  Rat   463 DVEDFRQCVKLTREIFAQEAFA---------PFRGKELQPGSHVQSDKEIDAFVRAKADSAYHPS 518

  Fly   546 GTCKMGPATDNTSVVDAQLRIHGIRGLRVVDASVLPNVPAGHTNAIVIMVAEKAGDMIK 604
            .|||||..:|.|:|||.|.|:.|:..|||:|||::|:|.:|:.||..||:||||.|:||
  Rat   519 CTCKMGQPSDPTAVVDQQTRVIGVENLRVIDASIMPSVVSGNLNAPTIMIAEKAADVIK 577

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6142	NP_651466.1	BetA	45..610	CDD:441878	205/579 (35%)
Chdh	NP_942026.1	PRK02106	45..591	CDD:235000	205/579 (35%)