DRSC/TRiP Functional Genomics Resources

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Protein Alignment dysf and NPAS4

DIOPT Version :9

Sequence 1:NP_733137.3 Gene:dysf / 43174 FlyBaseID:FBgn0039411 Length:920 Species:Drosophila melanogaster
Sequence 2:XP_016873026.1 Gene:NPAS4 / 266743 HGNCID:18983 Length:879 Species:Homo sapiens


Alignment Length:849 Identity:210/849 - (24%)
Similarity:323/849 - (38%) Gaps:261/849 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 QQQPQTTQQQHATQQQ----QQQQQQTAGMFTRFDA------NKSTKGASKMRRDLINAEIANLR 176
            :|:...::::.:|:::    ..::::.:|  ||..|      .:|||||||.|||.|||||.||:
Human    39 EQRASLSERRGSTEEEAAGASGRERRCSG--TRAGAPQPPVMYRSTKGASKARRDQINAEIRNLK 101

  Fly   177 DLLPLPQSTRQRLSQLQLMALVCVYVRKANYFQQVFKRHNAMHHLHHQTATPNIG---------- 231
            :||||.::.:.|||.|.:|:|.|:|.||..:|               ...||..|          
Human   102 ELLPLAEADKVRLSYLHIMSLACIYTRKGVFF---------------AGGTPLAGPTGLLSAQEL 151

  Fly   232 --FSKALSGFLMMLTQNGKLLYISDNAAEYLGHSMEDLLIHGDSVYDIIDKQDHANIQAELNRNV 294
              ...||.|||::.|..|||||:|::.:|:|||||.||:..|||:|||||..||..::.:|  .:
Human   152 EDIVAALPGFLLVFTAEGKLLYLSESVSEHLGHSMVDLVAQGDSIYDIIDPADHLTVRQQL--TL 214

  Fly   295 PPQPGGSSQASSGGAGGAGGAGDSTSSNGSAAGAGGAGGASSLEGEHRMFLCRMNVSRNARRQMR 359
            |                                       |:|:.: |:|.||.|.|::.|||. 
Human   215 P---------------------------------------SALDTD-RLFRCRFNTSKSLRRQS- 238

  Fly   360 FGDQKVVLVQGHYLSFLP-LCSRNEPVFLATCTPIAMPETRECVVQGA------TNVFTTIHSMD 417
             ...|:||::|.:.:..| ......|||.|.|.|:. |..|.....|.      ..:|.:.|:.|
Human   239 -AGNKLVLIRGRFHAHPPGAYWAGNPVFTAFCAPLE-PRPRPGPGPGPGPASLFLAMFQSRHAKD 301

  Fly   418 MKIAHIDKNGEFHLGYDKSTLQGTSWYNLIHSDNLTEAQKKHSLIIQSEQDRSCILLVRMQRSSG 482
            :.:..|.::...:||:::|.|...|||.|:|.::|..|..:|..::....|....::||:|..:|
Human   302 LALLDISESVLIYLGFERSELLCKSWYGLLHPEDLAHASAQHYRLLAESGDIQAEMVVRLQAKTG 366

  Fly   483 EYTWVHVVLQVRDSPDSTQQPVIVCTNQVLNDREASIMLANSWLYHYYTVQSKIQFGMPLDSGIR 547
            .:.|::.:| ..:.|:..    |...|..::|.||       |...........|....|     
Human   367 GWAWIYCLL-YSEGPEGP----ITANNYPISDMEA-------WSLRQQLNSEDTQAAYVL----- 414

  Fly   548 VPPGTPSSGYYSPHSSHPPATPGGATPNLGIASSFGPHHHPHHSHHPHHHHHHHHPATAYHHHPH 612
               |||:                       :..||                    |.......  
Human   415 ---GTPT-----------------------MLPSF--------------------PENILSQE-- 431

  Fly   613 MGTYGGVYHAKAAIELKEDQPLFCFQEPVDYSQVNSHVNPPNATSTPNPP----ISKSSTPPPPK 673
                          |.....|||           .:.:..|.:||.|:.|    :|.|...|.|.
Human   432 --------------ECSSTNPLF-----------TAALGAPRSTSFPSAPELSVVSASEELPRPS 471

  Fly   674 KRARKLEPLY----------LHAERSPAAAITPEPDCYAIHTHPAAAYATSSVVSSDASVIYATI 728
            |   :|:..|          |.||.|.....||.   |..|.....|:..|      ....:.|.
Human   472 K---ELDFSYLTFPSGPEPSLQAELSKDLVCTPP---YTPHQPGGCAFLFS------LHEPFQTH 524

  Fly   729 VPTRPRLPNKSLPPDPADFIEQWNPS---------PPWSESAQKASLDSFGSSHELSPCITTTPP 784
            :||......:.|.|..|.|.:|..||         .|......:.|:.|:  ..:|:||.:|.|.
Human   525 LPTPSSTLQEQLTPSTATFSDQLTPSSATFPDPLTSPLQGQLTETSVRSY--EDQLTPCTSTFPD 587

  Fly   785 --TPTSATPHQSGLGTTQTIGPAFSFEWMSDPL-VPVTYQQWPPTGDHHQHLSQHLSQS---QNH 843
              .|::||                    ..:|| .|...|..||:.....||... ||:   |..
Human   588 QLLPSTAT--------------------FPEPLGSPAHEQLTPPSTAFQAHLDSP-SQTFPEQLS 631

  Fly   844 QNPLQ---QQQNEQLLLGQQPHLHQQHQH-----LALHHGRGEHSLEGESQGVVVVPPIPISIPI 900
            .||.:   .|:....|..:.|.......:     |||...||..|::        ||.:|..:..
Human   632 PNPTKTYFAQEGCSFLYEKLPPSPSSPGNGDCTLLALAQLRGPLSVD--------VPLVPEGLLT 688

  Fly   901 PTAT 904
            |.|:
Human   689 PEAS 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dysfNP_733137.3 PAS 235..292 CDD:214512 31/56 (55%)
PAS 407..506 CDD:238075 24/98 (24%)
PAS_11 408..517 CDD:291273 27/108 (25%)
NPAS4XP_016873026.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165160043
Domainoid 1 1.000 134 1.000 Domainoid score I5029
eggNOG 1 0.900 - - E1_28JIU
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 210 1.000 Inparanoid score I3676
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005466
OrthoInspector 1 1.000 - - oto89767
orthoMCL 1 0.900 - - OOG6_108359
Panther 1 1.100 - - LDO PTHR23043
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4418
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1312.750

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