DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ASTL and Astl

DIOPT Version :10

Sequence 1:XP_011509507.1 Gene:ASTL / 431705 HGNCID:31704 Length:436 Species:Homo sapiens
Sequence 2:NP_001099974.2 Gene:Astl / 296129 RGDID:1562279 Length:439 Species:Rattus norvegicus


Alignment Length:422 Identity:297/422 - (70%)
Similarity:329/422 - (77%) Gaps:5/422 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    20 LSGPGVILGAPLASSCAGACGTSFPDGLTPEGTQASGDKDIPAINQGLILEETPESSFLIEGDII 84
            ||..|:|||||.||.|:|.|.||.|:|.||||::.|.||||||||||||.|||||||||:|||||
  Rat    18 LSLTGLILGAPSASRCSGVCSTSVPEGFTPEGSRVSQDKDIPAINQGLISEETPESSFLVEGDII 82

Human    85 RPSPFRLLSATSNKWPMGGSGVVEVPFLLSSKYDEPSRQVILEALAEFERSTCIRFVTYQDQRDF 149
            |||||||||.|:||||.|..|:||:||||||||||||||||:||.|||||.||||||.|:.||||
  Rat    83 RPSPFRLLSVTNNKWPKGVDGIVEIPFLLSSKYDEPSRQVIMEAFAEFERFTCIRFVAYRGQRDF 147

Human   150 ISIIPMYGCFSSVGRSGGMQVVSLAPTCLQKGRGIVLHELMHVLGFWHEHTRADRDRYIRVNWNE 214
            :||:||.||||.||||||||||||||||||||||||||||||||||||||:||||||||||||||
  Rat   148 VSILPMAGCFSGVGRSGGMQVVSLAPTCLQKGRGIVLHELMHVLGFWHEHSRADRDRYIRVNWNE 212

Human   215 ILPGFEINFIKSQSSNMLTPYDYSSVMHYGRLAFSRRGLPTITPLWAPSVHIGQRWNLSASDITR 279
            ||||||||||||::||||.||||||||||||.|||.||.|||.|||..|||||||||||.|||||
  Rat   213 ILPGFEINFIKSRNSNMLAPYDYSSVMHYGRFAFSWRGQPTIIPLWTSSVHIGQRWNLSTSDITR 277

Human   280 VLKLYGCSPSGPRPRGRGSHAHSTGRSPAPASLS-LQRLLEALSAESRSPDPSGSSAGGQPVPAG 343
            |.:||.||||.|...|||..|.|.||||.|||:| |||||||||.||||..||||..|||.:.||
  Rat   278 VCRLYSCSPSVPDSHGRGFEAPSDGRSPTPASISHLQRLLEALSEESRSSAPSGSGTGGQGIIAG 342

Human   344 PGESPHGWESPALKKLSAEASARQPQTLASSPRSRPGAGAPGVAQEQSWLAGVSTKPTVPSSEAG 408
            ..:|..|||.||....|..|.||.||.||::.:|||||||..::.||...|.....|.|...:|.
  Rat   343 FVDSQQGWEHPAQSTFSVGALARSPQMLAAASKSRPGAGADSISLEQFQPAQAPAVPPVSFPDAR 407

Human   409 IQPVPVQGSPA----LPGGCVPRNHFKGMSED 436
            .:|.|:|.:.|    |||||.|.:|.:.:..|
  Rat   408 DKPTPIQDAFARLALLPGGCAPGSHIREVPRD 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ASTLXP_011509507.1 ZnMc 105..286 CDD:469599 155/180 (86%)
PHA03307 273..>428 CDD:223039 86/159 (54%)
AstlNP_001099974.2 None

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