back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG14544 and Trmt61a

DIOPT Version :9

Sequence 1:	NP_001303484.1	Gene:	CG14544 / 43170	FlyBaseID:	FBgn0039407	Length:	317	Species:	Drosophila melanogaster
Sequence 2:	NP_001007707.1	Gene:	Trmt61a / 314462	RGDID:	1359191	Length:	290	Species:	Rattus norvegicus

Alignment Length:	314	Identity:	150/314 - (47%)
Similarity:	202/314 - (64%)	Gaps:	27/314 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MSFLKPKTHIEKGDVVILYLSVSSMHAIEAVPEIVNKKGETIPHIFQTNYGSLKVE-NIIGVEYG 64
            |||:..:..|::||..||.|...||.|:.     |.:..:|     ||.:|.|:.. ::||..:|
  Rat     1 MSFVAYEELIKEGDTAILSLGHGSMVAVR-----VQRGAQT-----QTRHGVLRHSVDLIGRPFG 55

  Fly    65 SKVELSK-GWAHVLQPTPELWTQTLPHRTQIIYTPDISMIIHQLEVRPGAVVVESGTGSGSLSHY 128
            |||..|: ||.:||.|||||||..|||||||:|:.||::|...||:|||:||.||||||||:||.
  Rat    56 SKVTCSRGGWVYVLHPTPELWTVNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHA 120

  Fly   129 FLRALKPTGHLHTFDFHEARADQARDEFRRHGIADFVTVYHRDVCNLGFGAELDGKADAVFLDLP 193
            .:|::.|||||||.:||:.|||:||:||::|.::.:|||:.:|||..|||  :...|||||||:|
  Rat   121 IIRSIAPTGHLHTVEFHQQRADKAREEFQQHRVSQWVTVHTQDVCRSGFG--VVHVADAVFLDIP 183

  Fly   194 APDLAVPHAFKALKLSGGRFCSFSPCIEQSQRCIQELTKLGFNEIVSLEVLQQENVVKTRTLPVI 258
            :|..||.||:.|||:.|||||||||||||.||..|.|...||.|:.:||||.|...|:|.:||:.
  Rat   184 SPWEAVGHAWDALKVEGGRFCSFSPCIEQVQRTCQALAAHGFTELSTLEVLPQVYNVRTVSLPLP 248

  Fly   259 DLEFLKLPKTDETTAATNALESKAPKEVKKYLTSSNPQTLPGHTGFLTFATLPP 312
            ||             ..:.||.....:...:.:.:..:...||||:|||||..|
  Rat   249 DL-------------GADDLEGNVGSDATPFRSGTPMKETVGHTGYLTFATKTP 289

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.