DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL34a and Rpl34-ps1

DIOPT Version :10

Sequence 1:NP_651460.2 Gene:RpL34a / 43169 FlyBaseID:FBgn0039406 Length:162 Species:Drosophila melanogaster
Sequence 2:NP_001186279.1 Gene:Rpl34-ps1 / 619547 MGIID:3704270 Length:117 Species:Mus musculus


Alignment Length:113 Identity:66/113 - (58%)
Similarity:78/113 - (69%) Gaps:3/113 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPR--CGQCKEKLHGITPSRPSERP 63
            ||||||.||||||||.|||.|:.||||.|:||.|.||....|:  ||.|..:|.|:...||....
Mouse     1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLM 65

  Fly    64 RMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKI-VKALKSQREA 110
            |:||..|.|||.|||.:|..|:|:||.|||||||||| ||.||:|.::
Mouse    66 RLSKTQKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVLKAQAQS 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL34aNP_651460.2 Ribosomal_L34e 1..94 CDD:426119 53/94 (56%)
Rpl34-ps1NP_001186279.1 Ribosomal_L34e 1..96 CDD:426119 53/94 (56%)

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