DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL34a and rpl34

DIOPT Version :10

Sequence 1:NP_651460.2 Gene:RpL34a / 43169 FlyBaseID:FBgn0039406 Length:162 Species:Drosophila melanogaster
Sequence 2:NP_957416.1 Gene:rpl34 / 394097 ZFINID:ZDB-GENE-040426-1033 Length:117 Species:Danio rerio


Alignment Length:112 Identity:67/112 - (59%)
Similarity:77/112 - (68%) Gaps:3/112 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPR--CGQCKEKLHGITPSRPSERP 63
            ||||||.||||||||.|||.|:.||||.|:||.|.||....|:  ||.|..:|.||...||....
Zfish     1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKTGKSPKSACGICPGRLRGIRAVRPQVLM 65

  Fly    64 RMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKI-VKALKSQRE 109
            |:||..|.|||.|||.:|..|:|:||.|||||||||| ||.||:|.:
Zfish    66 RLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVLKAQAQ 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL34aNP_651460.2 Ribosomal_L34e 1..94 CDD:426119 54/94 (57%)
rpl34NP_957416.1 Ribosomal_L34e 1..96 CDD:426119 54/94 (57%)

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