DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL34a and rpl3401

DIOPT Version :10

Sequence 1:NP_651460.2 Gene:RpL34a / 43169 FlyBaseID:FBgn0039406 Length:162 Species:Drosophila melanogaster
Sequence 2:NP_594438.1 Gene:rpl3401 / 2541989 PomBaseID:SPAC23A1.08C Length:112 Species:Schizosaccharomyces pombe


Alignment Length:112 Identity:61/112 - (54%)
Similarity:76/112 - (67%) Gaps:4/112 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITPSRPSERPRM 65
            |.||:|.||||:||||||:.||::|||..:.|.::||..|:||||.....|.||...||.|..|:
pombe     1 MAQRVTYRRRLAYNTRSNRTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPREFARL 65

  Fly    66 SKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIV----KALKSQR 108
            |...|||.|.|||.|..:.:::||||||||||||||    |.|.||:
pombe    66 SHNKKTVQRAYGGCLSANAVKDRIVRAFLIEEQKIVKQKLKQLSSQK 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL34aNP_651460.2 Ribosomal_L34e 1..94 CDD:426119 48/92 (52%)
rpl3401NP_594438.1 Ribosomal_L34e 1..94 CDD:426119 48/92 (52%)

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