DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL34a and rpl-34

DIOPT Version :10

Sequence 1:NP_651460.2 Gene:RpL34a / 43169 FlyBaseID:FBgn0039406 Length:162 Species:Drosophila melanogaster
Sequence 2:NP_502330.1 Gene:rpl-34 / 178173 WormBaseID:WBGene00004448 Length:110 Species:Caenorhabditis elegans


Alignment Length:110 Identity:61/110 - (55%)
Similarity:80/110 - (72%) Gaps:1/110 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITPSRPSERPRM 65
            |..|:|.||||||||.|||:|:|:|||||||.||:||...:|:|.....|||||||:||.....:
 Worm     1 MSLRVTYRRRLSYNTTSNKKRLVKTPGGRLVVQYIKKRGQIPKCRDTGVKLHGITPARPIALRLL 65

  Fly    66 SKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIV-KALKSQRE 109
            .:..:||:|.|||.|..:.::|||.||||:|||||| |.:|.|::
 Worm    66 KRNERTVTRAYGGCLSPNAVKERITRAFLVEEQKIVNKVIKHQKD 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL34aNP_651460.2 Ribosomal_L34e 1..94 CDD:426119 50/92 (54%)
rpl-34NP_502330.1 Ribosomal_L34e 1..94 CDD:426119 50/92 (54%)

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