DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL34a and LOC1271236

DIOPT Version :10

Sequence 1:NP_651460.2 Gene:RpL34a / 43169 FlyBaseID:FBgn0039406 Length:162 Species:Drosophila melanogaster
Sequence 2:XP_061510651.1 Gene:LOC1271236 / 1271236 VectorBaseID:AGAMI1_000283 Length:155 Species:Anopheles gambiae


Alignment Length:153 Identity:85/153 - (55%)
Similarity:104/153 - (67%) Gaps:23/153 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVQRLTLRRRLSYNTRSNK---------RRI------------VRTPGGRLVYQYVKKNPTVPRC 44
            |.|..:||..:|.:|..|.         |.|            |||||||||||||||..|:|:|
Mosquito     1 MEQDTSLREYMSRSTGWNGSFLAQFFIIRTIDLLIACLRFLHSVRTPGGRLVYQYVKKRRTLPKC 65

  Fly    45 GQCKEKLHGITPSRPSERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKALKSQRE 109
            ||||::|:||.||||.||||||:|||||:||:||||||.||||||:|||||:|||:||.|::|::
Mosquito    66 GQCKKELNGIKPSRPCERPRMSRRLKTVTRTFGGVLCHHCLRERIIRAFLIDEQKVVKVLRAQQQ 130

  Fly   110 A--LVKPVKKVVEKKPVKAAAKK 130
            |  :.||||.....|..||.|.|
Mosquito   131 AKPVGKPVKAPKTTKTTKAGASK 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL34aNP_651460.2 Ribosomal_L34e 1..94 CDD:426119 65/113 (58%)
LOC1271236XP_061510651.1 None

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