DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL34a and rpl34

DIOPT Version :10

Sequence 1:NP_651460.2 Gene:RpL34a / 43169 FlyBaseID:FBgn0039406 Length:162 Species:Drosophila melanogaster
Sequence 2:NP_001352048.1 Gene:rpl34 / 101733401 XenbaseID:XB-GENE-957318 Length:117 Species:Xenopus tropicalis


Alignment Length:113 Identity:67/113 - (59%)
Similarity:78/113 - (69%) Gaps:3/113 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPR--CGQCKEKLHGITPSRPSERP 63
            ||||||.||||||||.|||.|:.||||.|:||.|.||....|:  ||.|..:|.||...||....
 Frog     1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGICPGRLRGIRAVRPKVLM 65

  Fly    64 RMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKI-VKALKSQREA 110
            |:||..|.|||.|||.:|..|:|:||.|||||||||| ||.||:|.::
 Frog    66 RLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVLKAQAQS 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL34aNP_651460.2 Ribosomal_L34e 1..94 CDD:426119 54/94 (57%)
rpl34NP_001352048.1 Ribosomal_L34e 1..96 CDD:426119 54/94 (57%)

Return to query results.
Submit another query.