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Protein Alignment Vps2 and VPS24
DIOPT Version :9
Sequence 1: | NP_651455.1 |
Gene: | Vps2 / 43164 |
FlyBaseID: | FBgn0039402 |
Length: | 256 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_012883.1 |
Gene: | VPS24 / 853825 |
SGDID: | S000001524 |
Length: | 224 |
Species: | Saccharomyces cerevisiae |
Alignment Length: | 188 |
Identity: | 51/188 - (27%) |
Similarity: | 90/188 - (47%) |
Gaps: | 29/188 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MDWLFGKKISPD---------EMLRKNQRALNKAMRDLDRERMKMEQQEKKIIADIKKMAKEGQM 56
||::......|| .:||||.|.:.|::|:|...:.|.:|. |||.||:..:
Yeast 1 MDYIKKAIWGPDPKEQQRRIRSVLRKNGRNIEKSLRELTVLQNKTQQL-------IKKSAKKNDV 58
Fly 57 DAVKIMAKDLVRTRRYAKKFMLMKANIQAVSLKIQTLKSQNTMAQAMKGVTKAMQNMNRQLNLPQ 121
..|::.||:|.:..:...:....:|.:.:|.:||......||::..|......|:.:|..:.|||
Yeast 59 RTVRLYAKELYQINKQYDRMYTSRAQLDSVRMKIDEAIRMNTLSNQMADSAGLMREVNSLVRLPQ 123
Fly 122 IQKILQDFEKQSEMMDMKEEMINDAIDDAMEDEGD---------EEETDAVVSQVLDE 170
::..:.:.||:. ||..:|::.:||.||..|| :||.:.:|.|..:|
Yeast 124 LRNTMIELEKEL----MKSGIISEMVDDTMESVGDVGEEMDEAVDEEVNKIVEQYTNE 177
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Vps2 | NP_651455.1 |
Snf7 |
17..185 |
CDD:281366 |
45/163 (28%) |
VPS24 | NP_012883.1 |
Did4 |
26..224 |
CDD:227778 |
45/163 (28%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5491 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG53529 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.820 |
|
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