DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Vps2 and VPS2.2

DIOPT Version :9

Sequence 1:	NP_651455.1	Gene:	Vps2 / 43164	FlyBaseID:	FBgn0039402	Length:	256	Species:	Drosophila melanogaster
Sequence 2:	NP_199269.1	Gene:	VPS2.2 / 834483	AraportID:	AT5G44560	Length:	222	Species:	Arabidopsis thaliana

Alignment Length:	252	Identity:	82/252 - (32%)
Similarity:	135/252 - (53%)	Gaps:	33/252 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly     4 LFGKKISPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKIIADIKKMAKEGQMDAVKIMAKDLVR 68
            :|.||.:|.:.||.::|.:..|.|.::||...::.:||:::|:|||.||.|...|.||:|:.|||
plant     3 IFKKKTTPKDALRTSKREMAVATRGIEREITSLQLEEKRLVAEIKKTAKTGNEAATKILARQLVR 67

  Fly    69 TRRYAKKFMLMKANIQAVSLKIQTLKSQNTMAQAMKGVTKAMQNMNRQLNLPQIQKILQDFEKQS 133
            .|:........:|.|:.|:...|.|.:..:::..|||.||||..||:|:...:..|:::||:|||
plant    68 LRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQS 132

  Fly   134 EMMDMKEEMINDAIDDAMEDEGDEEETDAVVSQVLDELGLQLGEQLGDLPSASGSLSIAGGAGAQ 198
            ..:||..||:::|||:.::.:..||||:.:.:|||||:|:.:..||...|.         |..|.
plant   133 AQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSSAPK---------GRIAT 188

  Fly   199 KAQAVAAGGVGGGGAAGGGGASGGGAGGPGAPGGSGASSPMSDADADLQARLDKLRK 255
            |.                       |..|.:...:..:|..|:.| :|:.||..||:
plant   189 KT-----------------------AAPPASTAATNKNSESSEVD-ELEKRLASLRR 221

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Vps2	NP_651455.1	Snf7	17..185	CDD:281366	63/167 (38%)
VPS2.2	NP_199269.1	Snf7	17..184	CDD:419749	63/175 (36%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5491
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53529
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	5	4.780