DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps2 and VPS2.1

DIOPT Version :9

Sequence 1:NP_651455.1 Gene:Vps2 / 43164 FlyBaseID:FBgn0039402 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_565336.1 Gene:VPS2.1 / 815211 AraportID:AT2G06530 Length:225 Species:Arabidopsis thaliana


Alignment Length:255 Identity:122/255 - (47%)
Similarity:174/255 - (68%) Gaps:32/255 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDWLFGKKISPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKIIADIKKMAKEGQMDAVKIMAKD 65
            |:.:|||:.:|.|:||:|:|.|:|::|:::|||..::.||||:|.:|||.||:|||.|||:||||
plant     2 MNSIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLINEIKKTAKQGQMGAVKVMAKD 66

  Fly    66 LVRTRRYAKKFMLMKANIQAVSLKIQTLKSQNTMAQAMKGVTKAMQNMNRQLNLPQIQKILQDFE 130
            |:|||...:||..:|:.:|.|||:||||||...|.:|||||||||..||||:|||.:|||:|:||
plant    67 LIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFE 131

  Fly   131 KQSEMMDMKEEMINDAIDDAMEDEGDEEETDAVVSQVLDELGLQLGEQLGDLPSASGSLSIAGGA 195
            :|:|.|:|..|::.||||||:|.:.:||||:.:|||||||:|:.:.::|.:.|  ||::::. .|
plant   132 RQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQELVNAP--SGAVAVP-AA 193

  Fly   196 GAQKAQAVAAGGVGGGGAAGGGGASGGGAGGPGAPGGSGASSPMSDADADLQARLDKLRK 255
            ..:..||.|.|....||                             .|:|||||||.|||
plant   194 KNKVVQAEATGAEDSGG-----------------------------IDSDLQARLDNLRK 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps2NP_651455.1 Snf7 17..185 CDD:281366 94/167 (56%)
VPS2.1NP_565336.1 Snf7 18..187 CDD:397437 95/170 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 200 1.000 Domainoid score I877
eggNOG 1 0.900 - - E1_COG5491
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6382
Inparanoid 1 1.050 227 1.000 Inparanoid score I1163
OMA 1 1.010 - - QHG53529
OrthoDB 1 1.010 - - D1254120at2759
OrthoFinder 1 1.000 - - FOG0005101
OrthoInspector 1 1.000 - - oto3695
orthoMCL 1 0.900 - - OOG6_102450
Panther 1 1.100 - - LDO PTHR10476
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3622
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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