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Protein Alignment Vps2 and did-2
DIOPT Version :9
Sequence 1: | NP_651455.1 |
Gene: | Vps2 / 43164 |
FlyBaseID: | FBgn0039402 |
Length: | 256 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_490974.1 |
Gene: | did-2 / 171801 |
WormBaseID: | WBGene00017735 |
Length: | 205 |
Species: | Caenorhabditis elegans |
Alignment Length: | 185 |
Identity: | 48/185 - (25%) |
Similarity: | 104/185 - (56%) |
Gaps: | 11/185 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 LRKNQRALNKAMRDLDRERMKMEQQEK----KIIADIKKMAKEGQMDAVKIMAKDLVRTRRYAKK 75
|.|:...|..|.:.|::...:.|:.|| |:.|.||| |..:..::.|::.:|.:..|..
Worm 10 LEKHLFDLKFAAKQLEKNAQRCEKDEKVEKDKLTAAIKK----GNKEVAQVHAENAIRKKNEAVN 70
Fly 76 FMLMKANIQAVSLKIQTLKSQNTMAQAMKGVTKAMQNMNRQLNLPQIQKILQDFEKQSEMMDMKE 140
::.|.|.|.||:.::||..:|..:..:|.||.|||::..:.:||.::|:::..||:..|.:|:..
Worm 71 YIKMAARIDAVAARVQTAATQKRVTASMSGVVKAMESAMKSMNLEKVQQLMDRFERDFEDLDVTT 135
Fly 141 EMINDAIDDAMEDEGDEEETDAVVSQVLDELGLQLGEQL-GDLPSA--SGSLSIA 192
:.:...:|........:.:.||::::..|:.|::|.::| .::|:| :|:.:::
Worm 136 KTMEKTMDGTTVLNAPKSQVDALIAEAADKAGIELNQELPSNVPTALPTGTQAVS 190
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Vps2 | NP_651455.1 |
Snf7 |
17..185 |
CDD:281366 |
45/172 (26%) |
did-2 | NP_490974.1 |
Snf7 |
16..181 |
CDD:304451 |
44/168 (26%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5491 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
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