DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Exo84 and Exoc8

DIOPT Version :9

Sequence 1:NP_996299.1 Gene:Exo84 / 43163 FlyBaseID:FBgn0266668 Length:672 Species:Drosophila melanogaster
Sequence 2:NP_620612.1 Gene:Exoc8 / 245709 RGDID:620245 Length:716 Species:Rattus norvegicus


Alignment Length:707 Identity:203/707 - (28%)
Similarity:338/707 - (47%) Gaps:79/707 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KEFDDFNFSVEKYTKDLTRECVGGSDLQQRKKEIEAYNETTAATLKQTCKKNYMEFIQTAKEISR 66
            ::.:...|....|.|.|:::..|..|||:.::.::|..|.||..||:...:||.:||:||:||| 
  Rat    11 RQLESGGFEARLYVKQLSQQSDGDRDLQEHRQRVQALAEETAQNLKRNVYQNYRQFIETAREIS- 74

  Fly    67 NLESEMYQLSHILIEQRNILATM-------------TDGKTSSHLKAESLEAES----------- 107
            .||||||||||:|.||::.|.::             |...|:.....|...|::           
  Rat    75 YLESEMYQLSHLLTEQKSSLESIPLALLPAAAAGASTGEDTAGAGPRERGAAQAGFLPGPAGVPR 139

  Fly   108 ---TTATEDLENSHATRAVKEMVQGFNGNLE--GKTFLNEGALIELDSNDYRPIQRVFFFLFNDV 167
               .|..|..:.:..|  :.|.|:|....||  |:..:..|.|:|.:::....:|||..||.||.
  Rat   140 EGPGTGEEGKQRTLTT--LLEKVEGCRDLLETPGQYLVYNGDLVEYEADHMAQLQRVHGFLMNDC 202

  Fly   168 LIVCKVKHDKR--LDFLTEYDPKKIAVINIKDLDGVKNAINIITPDGSKIYQSITAAGKTEWIEK 230
            |:|......:|  ..:...|...::||:|:||...:|:...::....|:|:|:..|..|.||:|.
  Rat   203 LLVATWLPQRRGMYRYNALYPLDRLAVVNVKDNPPMKDMFKLLMFPESRIFQAENAKIKREWLEV 267

  Fly   231 LEEAFRFDQQKKPKKGQ------APQPPTRAKQQSKASTPEKETTPQSPGQPKSLE---DETPEW 286
            |||..|....|:.::.:      ||.|.|     ||.|.|.::...:....|::.|   |.:.||
  Rat   268 LEETKRALSDKRRREQEEAAALRAPPPVT-----SKGSNPFEDEAEEELATPEAEEEKVDLSMEW 327

  Fly   287 LSTASEEIQTLVAQRHFEDAQELIKRTQDFLRNENRKKLPLADAIETKVKQQELKLINVLLKELS 351
            :....|::...:|||.||.|.:|:.:...:|  |::...|....:..||.::..:|..||:.|| 
  Rat   328 IQELPEDLDVCIAQRDFEGAVDLLDKLNHYL--EDKPSPPSVKELRAKVDERVRQLTEVLVFEL- 389

  Fly   352 NSHNRNLQIALRAAKRPLKILVEMGRYRQASATLLKVCAVSLRVAQREARRNNA------DISEL 410
             |.:|:|:...:|.:|.:..|:.:|:..:|....|:..|.::..|.|:.|...|      .:..:
  Rat   390 -SPDRSLRGGPKATRRAVSQLIRLGQCTKACELFLRNRAAAVHTAIRQLRIEGATLLYIHKLCHV 453

  Fly   411 FFCDLTQVACDFLTAFE-KQPACVSALVVWCNAELQYFASQLIKHYLTKGTSLESVAKCVERVRK 474
            ||..|.:.|.:|.|.|. ....|.||.|||..:.:..|.....|.......||.:.|:||:..::
  Rat   454 FFTSLLETAREFETDFAGTDSGCYSAFVVWARSAMGMFVDAFSKQVFDSKESLSTAAECVKVAKE 518

  Fly   475 PSTKLTEIGLDISY--------HLEGLLRTTLESLIEESKERLLDSVGRTEESWQPYNLQTKSNL 531
            ...:|.|||||:::        .::|.|.:..|.:||.:|.|      .:||.|:..||.|...|
  Rat   519 HCQQLGEIGLDLTFIIHALLVKDIQGALLSYKEIIIEATKHR------NSEEMWRRMNLMTPEAL 577

  Fly   532 KRLLLELDVLGIDVRAQATG-DTWINLTQSTVVFIRHFLQLTEYCGCLAKCETLLQSLELLLKEL 595
            .:|..|:...|:....|.|| |.|:||:.:.|.|.:..:...|....|...|..:..||.|::.:
  Rat   578 GKLKEEMRSCGVSNFEQYTGDDCWVNLSYTVVAFTKQTMGFLEEALKLYFPELHMVLLESLVEVI 642

  Fly   596 FIA-QH---SLKPPSDMAVDPNFVMKNKIFLVDNLLPIAIDKFRQISGRQCEGLREL 648
            .:| ||   ||:...| .....|:.:|..||.|.:||:...:|.:..|:..:.|::|
  Rat   643 LVAVQHVDYSLRCEQD-PEKKTFIRQNASFLYDTVLPVVERRFEEGVGKPAKQLQDL 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Exo84NP_996299.1 Vps51 4..90 CDD:285862 37/98 (38%)
PH_RalBD_exo84 132..242 CDD:269933 35/113 (31%)
PH 142..234 CDD:278594 30/93 (32%)
RCSD 225..293 CDD:282963 21/76 (28%)
Exo84_C 285..485 CDD:293136 58/206 (28%)
Exoc8NP_620612.1 Vps51 13..97 CDD:285862 37/84 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 110..149 6/38 (16%)
PH_RalBD_exo84 167..279 CDD:269933 35/111 (32%)
PH 174..273 CDD:278594 31/98 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 275..319 10/48 (21%)
Exo84_C 326..531 CDD:293136 60/208 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350615
Domainoid 1 1.000 88 1.000 Domainoid score I7793
eggNOG 1 0.900 - - E1_KOG2215
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H44545
Inparanoid 1 1.050 247 1.000 Inparanoid score I3184
OMA 1 1.010 - - QHG52637
OrthoDB 1 1.010 - - D1357584at2759
OrthoFinder 1 1.000 - - FOG0006078
OrthoInspector 1 1.000 - - oto98369
orthoMCL 1 0.900 - - OOG6_104892
Panther 1 1.100 - - LDO PTHR21426
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5005
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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