DRSC/TRiP Functional Genomics Resources

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Protein Alignment gro and UTP7

DIOPT Version :9

Sequence 1:NP_996298.1 Gene:gro / 43162 FlyBaseID:FBgn0001139 Length:730 Species:Drosophila melanogaster
Sequence 2:NP_011005.1 Gene:UTP7 / 856815 SGDID:S000000884 Length:554 Species:Saccharomyces cerevisiae


Alignment Length:308 Identity:62/308 - (20%)
Similarity:109/308 - (35%) Gaps:97/308 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   482 SQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSAAPACYALAISPDS 546
            ::|..|::....|.:..||....|:..||...|...|::  |.::.:||.:.|....|:|.:|.:
Yeast   182 TELHRLKQHIEARHLDFLPYHYLLVTAGETGWLKYHDVS--TGQLVSELRTKAGPTMAMAQNPWN 244

  Fly   547 KVCFSCCSDGNIAVWD-LHNEILVRQFQGHTDGASCIDISPDGSRLWTGGLDNTVRSWDLREGRQ 610
            .|.....|:|.:::|. ...|.||:..... ...:.|.|...|..:.|.|.|.:::.||:|..:|
Yeast   245 AVMHLGHSNGTVSLWSPSMPEPLVKLLSAR-GPVNSIAIDRSGYYMATTGADRSMKIWDIRNFKQ 308

  Fly   611 L-----------------------------------------------------------QQHDF 616
            |                                                           ..|.|
Yeast   309 LHSVESLPTPGTNVSISDTGLLALSRGPHVTLWKDALKLSGDSKPCFGSMGGNPHRNTPYMSHLF 373

  Fly   617 S-SQIFSLGYCPTGDWLAVGMENSHVEVLHASKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDN 680
            : :::.:||:.|..|.|.||                     |::.:.:|.....|:    ...|.
Yeast   374 AGNKVENLGFVPFEDLLGVG---------------------HQTGITNLIVPGAGE----ANYDA 413

  Fly   681 L-LNAWRTPYGASIFQSKETSSVLS---CDISTDDKYIVTGSGDKKAT 724
            | ||.:.|....   |.:|..::|:   .|..|.|...: ||.||:::
Yeast   414 LELNPFETKKQR---QEQEVRTLLNKLPADTITLDPNSI-GSVDKRSS 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
groNP_996298.1 TLE_N 11..124 CDD:397828
WD40 442..727 CDD:238121 62/308 (20%)
WD40 repeat 447..486 CDD:293791 1/3 (33%)
WD40 repeat 494..532 CDD:293791 11/37 (30%)
WD40 repeat 537..573 CDD:293791 10/36 (28%)
WD40 repeat 580..615 CDD:293791 11/93 (12%)
WD40 repeat 620..653 CDD:293791 7/32 (22%)
WD40 repeat 661..695 CDD:293791 7/34 (21%)
WD40 repeat 702..726 CDD:293791 8/26 (31%)
UTP7NP_011005.1 WD40 repeat 116..149 CDD:293791
WD40 repeat 155..189 CDD:293791 2/6 (33%)
WD40 157..333 CDD:421866 35/153 (23%)
WD40 repeat 194..229 CDD:293791 10/36 (28%)
WD40 repeat 236..272 CDD:293791 10/35 (29%)
WD40 repeat 277..311 CDD:293791 11/33 (33%)
BING4CT 367..445 CDD:400457 22/105 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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