DRSC/TRiP Functional Genomics Resources

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Protein Alignment gro and DIP2

DIOPT Version :9

Sequence 1:NP_996298.1 Gene:gro / 43162 FlyBaseID:FBgn0001139 Length:730 Species:Drosophila melanogaster
Sequence 2:NP_013230.1 Gene:DIP2 / 850820 SGDID:S000004119 Length:943 Species:Saccharomyces cerevisiae


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
groNP_996298.1 TLE_N 11..124 CDD:397828
WD40 442..727 CDD:238121
WD40 repeat 447..486 CDD:293791
WD40 repeat 494..532 CDD:293791
WD40 repeat 537..573 CDD:293791
WD40 repeat 580..615 CDD:293791
WD40 repeat 620..653 CDD:293791
WD40 repeat 661..695 CDD:293791
WD40 repeat 702..726 CDD:293791
DIP2NP_013230.1 WD40 <16..150 CDD:225201
WD40 repeat 83..118 CDD:293791
WD40 88..501 CDD:421866
WD40 repeat 124..160 CDD:293791
WD40 repeat 168..201 CDD:293791
WD40 repeat 207..229 CDD:293791
WD40 repeat 256..284 CDD:293791
WD40 repeat 332..382 CDD:293791
WD40 383..685 CDD:238121
WD40 repeat 396..430 CDD:293791
WD40 repeat 434..470 CDD:293791
WD40 repeat 476..521 CDD:293791
WD40 repeat 535..570 CDD:293791
WD40 repeat 577..613 CDD:293791
WD40 repeat 618..654 CDD:293791
WD40 repeat 660..684 CDD:293791
Utp12 801..910 CDD:397900
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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