DRSC/TRiP Functional Genomics Resources

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Protein Alignment gro and AT5G64730

DIOPT Version :9

Sequence 1:NP_996298.1 Gene:gro / 43162 FlyBaseID:FBgn0001139 Length:730 Species:Drosophila melanogaster
Sequence 2:NP_568993.1 Gene:AT5G64730 / 836594 AraportID:AT5G64730 Length:299 Species:Arabidopsis thaliana


Alignment Length:317 Identity:68/317 - (21%)
Similarity:122/317 - (38%) Gaps:45/317 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 AHVRTNGIPHPSALTGGKPAYSFHMNGEGSLQPVPFPPDALVGVGIPRHARQINTL-SHGEVVCA 449
            ||:...   |..|:...:      .||:|: ..:....|..:.:..|.....|.|. |||..|..
plant    11 AHILKG---HEGAVLAAR------FNGDGN-YALTCGKDRTIRLWNPHRGILIKTYKSHGREVRD 65

  Fly   450 VTI-SNPTKYVYTGGKGCVKVWDISQ-------PGNKNPVSQLDCLQRDNYIRSVKLLPDGRTLI 506
            |.: |:..|:...||...|..||:|.       .|:            |..:.:||.......::
plant    66 VHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGH------------DGEVNAVKFNDSSSVVV 118

  Fly   507 VGGEASNLSIWDLASPTPRIKAELTSAAPACYALAISPDSKVCFSCCSDGNIAVWDLHNEILVRQ 571
            ..|...:|.:||..|.:......:.:......::.::....:..|.  ||.:..:|:.   :.|:
plant   119 SAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTEIIGGSV--DGTVRTFDMR---IGRE 178

  Fly   572 FQGHT-DGASCIDISPDGSRLWTGGLDNTVRSWDLREGRQLQQH-DFSSQIFSLGYCPTGDWLAV 634
            ...:. ...:||.||.||:.:..|.||:|:|..|...|..||.: ...|:.|....|.|.....|
plant   179 MSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHV 243

  Fly   635 --GMENSHV---EVLHASKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWR 686
              |.|:..|   :::.|....|::  .|:..|.|:.:.......:::..|..:..|:
plant   244 IGGSEDGLVFFWDLVDAKVLSKFR--AHDLVVTSVSYHPKEDCMLTSSVDGTIRVWK 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
groNP_996298.1 TLE_N 11..124 CDD:397828
WD40 442..727 CDD:238121 57/260 (22%)
WD40 repeat 447..486 CDD:293791 11/46 (24%)
WD40 repeat 494..532 CDD:293791 7/37 (19%)
WD40 repeat 537..573 CDD:293791 5/35 (14%)
WD40 repeat 580..615 CDD:293791 15/35 (43%)
WD40 repeat 620..653 CDD:293791 9/37 (24%)
WD40 repeat 661..695 CDD:293791 4/26 (15%)
WD40 repeat 702..726 CDD:293791
AT5G64730NP_568993.1 WD40 10..298 CDD:238121 67/315 (21%)
WD40 repeat 64..100 CDD:293791 9/35 (26%)
WD40 repeat 105..143 CDD:293791 7/37 (19%)
WD40 repeat 150..180 CDD:293791 5/34 (15%)
WD40 repeat 187..223 CDD:293791 15/35 (43%)
WD40 repeat 231..267 CDD:293791 8/35 (23%)
WD40 repeat 273..297 CDD:293791 3/23 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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