DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment gro and AT3G15470

DIOPT Version :9

Sequence 1:	NP_996298.1	Gene:	gro / 43162	FlyBaseID:	FBgn0001139	Length:	730	Species:	Drosophila melanogaster
Sequence 2:	NP_566515.1	Gene:	AT3G15470 / 820786	AraportID:	AT3G15470	Length:	883	Species:	Arabidopsis thaliana

Alignment Length:	769	Identity:	133/769 - (17%)
Similarity:	230/769 - (29%)	Gaps:	278/769 - (36%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 RHPAAGGPPPQGPIKFTI--ADTLERIKEEFNFLQAQYHSIKLECEKLSNEKTEMQRHYVMYYEM 69
            |:.:.|.|......|.::  :...|..:....|:.....|:..:..:|:.:...:.|..|:..|
plant   179 RYTSPGNPCSCSVSKLSVHHSSHSEISRTSSPFVNCSVGSVSADSLRLNGDSDCVLRESVVNEE- 242

  Fly    70 SYGLNVEMHKQTEIAKRLNTLINQLLPFLQADHQQQVLQAVERAKQVTMQELNLIIGHQQQHGIQ 134
                 ||:.....:......::|:    :|.|...:.::.|....|:||:|..:.:||
plant   243 -----VEVCTIKNLDNGKEFVVNE----IQEDGTWKKVKEVGTGTQMTMEEFEMCVGH------- 291

  Fly   135 QLLQQIHAQQVPGGPPQPMGALNPFGALGATMGLPHGPQGLLNKPPEHHRPDIKPTGLEGPAAAE 199
                                                                       .|...|
plant   292 -----------------------------------------------------------SPIVQE 297

  Fly   200 ERLRNSVSPADREKYRTRSPLDIENDSKRRKDE-KLQEDEGEKSDQ-----DLVVDVANEMESHS 258
            ...|.:|..:|:            |.||..:|. ...:|...||.:     ..:..||:.|..||
plant   298 LMRRQNVEDSDK------------NTSKENEDSGNSNKDNASKSKKKGSWFKSIKSVASSMTGHS 350

  Fly   259 PRPNGEHVSMEVRDRESLNGERLEKPSSSGIKQE---RPPSR-----SGSSSSRSTPSLKTKDME 315
            .    |..|.:.||..|..|.| ...|::...||   ..|.|     .|.||...|...||::::
plant   351 K----ERRSSDDRDTSSERGGR-RSSSATDDSQESSFHGPERVRVRQYGKSSKELTALYKTQEIQ 410

  Fly   316 KPGTPGAKARTPTPNAAAPAPGVNPKQMMPQGPPPAGYPGAPYQRPADPYQRPPSDPAYGRPPPM 380

plant   411 ----------------------------------------------------------------- 410

  Fly   381 PYDPHAHVRTNGIPHPSALTGGKPAYSFHMNGEGSLQPVPFPPDALVGVGIPRHARQINTLSHGE 445
                 ||                         .||:..:.|..|.
plant   411 -----AH-------------------------NGSIWSIKFSLDG-------------------- 425

  Fly   446 VVCAVTISNPTKYVYTGGKGC-VKVWDISQPGNKNPV----SQLDCLQRDNYIRSVKLLP--DGR 503
                       ||:.:.|:.| :.:|.:.:...|..:    .:|..|..:.......:.|  .||
plant   426 -----------KYLASAGEDCIIHIWQVVEAEKKGELLLDRPELLLLATNGSPEPTTMSPRRRGR 479

  Fly   504 TLIVGGEASNLSIWDLASPTPRIKAELTSAAPAC---------YALAISPDSKVCFSCCSDGNIA 559
            |.|   ...:||:.::..|.....   .|..|.|         ..||.| .|:...|...|..:.
plant   480 TSI---SRKSLSLENIFVPDSLFG---LSEKPFCSFQGHVDDVLDLAWS-KSQHLLSSSMDKTVR 537

  Fly   560 VWDLHNEILVRQFQGHTDGASCIDISPDGSRLW-TGGLDNTVRSWDLREGRQLQQHDFSSQIFSL 623
            :|:|.::..::.| .|:|..:||..:|...|.: :|.||..||.|.:.:.:.:..:|....:.|.
plant   538 LWNLSSQTCLKVF-SHSDYVTCIQFNPVDDRYFISGSLDAKVRVWSIPDRQVVDWYDLHEMVTSA 601

  Fly   624 GYCPTGDWLAVGMENSHVEVLHASK---PDKYQLHL-------HESCVLSLRFA-ACGKWFVSTG 677
            .|.|.|..:.||.......:..||.   ..|.|::|       |:..:...:|. ......:.|.
plant   602 CYTPDGQGVLVGSYKGSCRMYSASDNKLQQKSQINLQNKKKKAHQKKITGFQFVPGSSSEVLVTS 666

  Fly   678 KDNLLNAWRTPYGASIFQS----KETSSVLSCDISTDDKYIVTGSGDKKATVYE 727
            .|:.:   |...|..:...    :.|||.:|..|:.|.||:|:.|.|....:::
plant   667 SDSRI---RVVDGTDLVNKLKGFRNTSSQISASITADGKYVVSASEDSHVYIWK 717

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
gro	NP_996298.1	TLE_N	11..124	CDD:397828	20/114 (18%)
		WD40	442..727	CDD:238121	69/316 (22%)
		WD40 repeat	447..486	CDD:293791	7/43 (16%)
		WD40 repeat	494..532	CDD:293791	8/39 (21%)
		WD40 repeat	537..573	CDD:293791	9/44 (20%)
		WD40 repeat	580..615	CDD:293791	10/35 (29%)
		WD40 repeat	620..653	CDD:293791	9/35 (26%)
		WD40 repeat	661..695	CDD:293791	5/34 (15%)
		WD40 repeat	702..726	CDD:293791	8/23 (35%)
AT3G15470	NP_566515.1	WD40	350..728	CDD:225201	94/510 (18%)
		WD40	406..717	CDD:295369	76/447 (17%)
		WD40 repeat	417..511	CDD:293791	21/130 (16%)
		WD40 repeat	516..550	CDD:293791	8/34 (24%)
		WD40 repeat	557..593	CDD:293791	10/35 (29%)
		WD40 repeat	598..641	CDD:293791	11/42 (26%)
		WD40 repeat	649..685	CDD:293791	5/38 (13%)
		WD40 repeat	692..716	CDD:293791	8/23 (35%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910