DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gro and tle2a

DIOPT Version :9

Sequence 1:NP_996298.1 Gene:gro / 43162 FlyBaseID:FBgn0001139 Length:730 Species:Drosophila melanogaster
Sequence 2:NP_001124076.1 Gene:tle2a / 565013 ZFINID:ZDB-GENE-030131-2826 Length:811 Species:Danio rerio


Alignment Length:852 Identity:482/852 - (56%)
Similarity:549/852 - (64%) Gaps:163/852 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYPSPVRHPAAGGPPPQG-------------------PIKFTIADTLERIKEEFNFLQAQYHSIK 46
            |:|.. |.||...|||..                   |:|.|..:||:||||||.|||.||||:|
Zfish     1 MFPQN-RPPAPLQPPPGSSASAAAAAAAAAAASGSTQPLKLTYPETLDRIKEEFQFLQTQYHSLK 64

  Fly    47 LECEKLSNEKTEMQRHYVMYYEMSYGLNVEMHKQTEIAKRLNTLINQLLPFLQADHQQQVLQAVE 111
            ||||||:.||||:|||||||||||||||:|||||||||||||.:..||:|||..:|||||:||:|
Zfish    65 LECEKLATEKTEIQRHYVMYYEMSYGLNIEMHKQTEIAKRLNVICAQLIPFLSQEHQQQVVQAME 129

  Fly   112 RAKQVTMQELNLIIG----------------HQQQHGIQQLLQQIHAQQVPGGPPQP-------M 153
            |||||||.|||..||                |..||..|.|....|    |.|.|.|       .
Zfish   130 RAKQVTMGELNASIGVRGLPPLPPTQQLQAQHLSQHAAQGLPMAPH----PSGLPHPGLALGGGS 190

  Fly   154 GALNPFGALGATMGLPHGPQGLLNKPPEHHRPDIKPTGLEGPAAAEERLRN---------SVSPA 209
            |.|...|||||.         |.:|....|...:      ..|||.|..|:         .:.|.
Zfish   191 GLLALSGALGAQ---------LASKDERAHLEAV------AAAAAAEHHRDWPRGRLPALPMIPI 240

  Fly   210 DREK--------YRTRSPLDIENDSKRRKDEK-LQEDEG---EKSDQDLVVD----VANEMESHS 258
            |||.        .:.||...:.|..||:.||| ...|.|   ||||.:||||    ....::|:|
Zfish   241 DREPGPSSLSNGDKGRSSDYLSNGKKRKADEKEFMTDYGSDAEKSDDNLVVDEDPSSPRSVQSYS 305

  Fly   259 PRPNGEHVSMEVRDRESLNGERLEK--PSSSGIKQERPPSRSGSSSSRSTPSLKTKD---MEKPG 318
            .|.||                 |:|  ||......:..|:...||||.::|| ::|:   .||..
Zfish   306 SRENG-----------------LDKLPPSRKEPLPQASPTSLASSSSAASPS-RSKEPPPREKSS 352

  Fly   319 TPGAKARTP------TPNAAAP--------APGVNPKQM-----------MPQG----PPP---- 350
            |||.|..||      ||..:.|        .|||:|..:           .|.|    |||    
Zfish   353 TPGMKPGTPMSQESSTPGPSVPPQFRPVPGKPGVDPLALGLRNPLAVQGAYPPGAFGLPPPGVNG 417

  Fly   351 -----AGYPGAPYQRPADPYQRPPSDPA---------YGRPPPMPYD-PHAHVRTNGIPH--PSA 398
                 ||| ||.... ..|.....:..|         |||.|.:.|: ||.|:|..|:|.  .||
Zfish   418 ELAGAAGY-GAGLHL-VSPQMNGSAAAAAAAAAAAAGYGRSPVVGYESPHPHMRVPGLPGSLQSA 480

  Fly   399 LTGGKPAYSFHMNGEGSLQPVPFPPDALVGVGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGG 463
            .| ||||||||::.:|.:||||||||||:|.|||||||||:||||||||||||||..|::|||||
Zfish   481 AT-GKPAYSFHVSADGQMQPVPFPPDALLGPGIPRHARQIHTLSHGEVVCAVTISTSTRHVYTGG 544

  Fly   464 KGCVKVWDISQPGNKNPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKA 528
            |||||||||||||:|:|::|||||.|||||||.||||||||||||||||.|||||||:|||||||
Zfish   545 KGCVKVWDISQPGSKSPMAQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLATPTPRIKA 609

  Fly   529 ELTSAAPACYALAISPDSKVCFSCCSDGNIAVWDLHNEILVRQFQGHTDGASCIDISPDGSRLWT 593
            ||||:||||||||||||:||||||||||||.||||||:.||||||||||||||||||.||::|||
Zfish   610 ELTSSAPACYALAISPDNKVCFSCCSDGNIVVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWT 674

  Fly   594 GGLDNTVRSWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSHVEVLHASKPDKYQLHLHE 658
            ||||||||.||||||||||||||:||||||||||||:|||||||:|:|||||.||||||||||||
Zfish   675 GGLDNTVRCWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVSKPDKYQLHLHE 739

  Fly   659 SCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKETSSVLSCDISTDDKYIVTGSGDKKA 723
            ||||||:||.||||||||||||||||||||||:|||||||:|||||||||.||::||||||||||
Zfish   740 SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGSSIFQSKESSSVLSCDISPDDQFIVTGSGDKKA 804

  Fly   724 TVYEVIY 730
            |||||||
Zfish   805 TVYEVIY 811

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
groNP_996298.1 TLE_N 11..124 CDD:397828 83/131 (63%)
WD40 442..727 CDD:238121 251/284 (88%)
WD40 repeat 447..486 CDD:293791 30/38 (79%)
WD40 repeat 494..532 CDD:293791 34/37 (92%)
WD40 repeat 537..573 CDD:293791 31/35 (89%)
WD40 repeat 580..615 CDD:293791 30/34 (88%)
WD40 repeat 620..653 CDD:293791 28/32 (88%)
WD40 repeat 661..695 CDD:293791 30/33 (91%)
WD40 repeat 702..726 CDD:293791 20/23 (87%)
tle2aNP_001124076.1 TLE_N 33..162 CDD:281857 82/128 (64%)
WD40 <517..809 CDD:225201 257/291 (88%)
WD40 519..808 CDD:238121 254/288 (88%)
WD40 repeat 528..567 CDD:293791 30/38 (79%)
WD40 repeat 575..613 CDD:293791 34/37 (92%)
WD40 repeat 618..654 CDD:293791 31/35 (89%)
WD40 repeat 661..696 CDD:293791 30/34 (88%)
WD40 repeat 701..734 CDD:293791 28/32 (88%)
WD40 repeat 742..776 CDD:293791 30/33 (91%)
WD40 repeat 783..807 CDD:293791 20/23 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 249 1.000 Domainoid score I2087
eggNOG 1 0.900 - - E1_KOG0639
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 878 1.000 Inparanoid score I384
OMA 1 1.010 - - QHG48578
OrthoDB 1 1.010 - - D251248at33208
OrthoFinder 1 1.000 - - FOG0000904
OrthoInspector 1 1.000 - - otm25426
orthoMCL 1 0.900 - - OOG6_101214
Panther 1 1.100 - - O PTHR10814
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X487
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.840

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