DRSC/TRiP Functional Genomics Resources

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Protein Alignment gro and atg16l1

DIOPT Version :9

Sequence 1:NP_996298.1 Gene:gro / 43162 FlyBaseID:FBgn0001139 Length:730 Species:Drosophila melanogaster
Sequence 2:NP_001017343.1 Gene:atg16l1 / 550097 XenbaseID:XB-GENE-1011170 Length:622 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
groNP_996298.1 TLE_N 11..124 CDD:397828
WD40 442..727 CDD:238121
WD40 repeat 447..486 CDD:293791
WD40 repeat 494..532 CDD:293791
WD40 repeat 537..573 CDD:293791
WD40 repeat 580..615 CDD:293791
WD40 repeat 620..653 CDD:293791
WD40 repeat 661..695 CDD:293791
WD40 repeat 702..726 CDD:293791
atg16l1NP_001017343.1 ATG16 31..206 CDD:370001
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..78
WIPI2-binding. /evidence=ECO:0000250|UniProtKB:Q676U5 207..230
FIP200-binding. /evidence=ECO:0000250|UniProtKB:Q676U5 230..242
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 244..271
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 287..320
WD40 333..620 CDD:238121
WD 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00221 335..374
WD40 repeat 341..379 CDD:293791
WD 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00221 379..418
WD40 repeat 384..420 CDD:293791
WD 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00221 421..460
WD40 repeat 427..462 CDD:293791
WD 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00221 462..499
WD40 repeat 467..500 CDD:293791
WD 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00221 501..540
WD40 repeat 506..542 CDD:293791
WD 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00221 547..588
WD40 repeat 552..576 CDD:293791
WD 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00221 590..622
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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