DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gro and UTP18

DIOPT Version :9

Sequence 1:NP_996298.1 Gene:gro / 43162 FlyBaseID:FBgn0001139 Length:730 Species:Drosophila melanogaster
Sequence 2:NP_057085.2 Gene:UTP18 / 51096 HGNCID:24274 Length:556 Species:Homo sapiens


Alignment Length:641 Identity:130/641 - (20%)
Similarity:223/641 - (34%) Gaps:183/641 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 PGGPPQPMGALNPFGALGATMGLPHGPQGLLNKPPEHHRPDIKPTGLEGPAAAEERLRNSVSPAD 210
            ||||||.....:.                  .|||.  ||......:...||.|||         
Human    35 PGGPPQKPAPSSQ------------------RKPPA--RPSAAAAAIAVAAAEEER--------- 70

  Fly   211 REKYRTRSPL-----------------DIENDS----KRRKDEKLQEDEGEKSDQDLVVDVANEM 254
            |.:.|.|..|                 |:|||.    :|.:..::||.| :..|.    :|.||.
Human    71 RLRQRNRLRLEEDKPAVERCLEELVFGDVENDEDALLRRLRGPRVQEHE-DSGDS----EVENEA 130

  Fly   255 ESHSPRPNGEHVSMEVRDRESLNGERLEKPSSSGIKQERPPSRSGSSSSRSTPSLKTKDMEK--- 316
            :.:.| |..:.|.::..|.:    |.:....::..:::.  .::.|.|..|..:||.:..|:   
Human   131 KGNFP-PQKKPVWVDEEDED----EEMVDMMNNRFRKDM--MKNASESKLSKDNLKKRLKEEFQH 188

  Fly   317 --PGTPG----AKARTPTPNAAAPAPG---------VNPKQMMPQGPPPAGYPGAPYQRPADPYQ 366
              .|.|.    .|.:|.:.:.:.....         ::....:|:|          ..:..:...
Human   189 AMGGVPAWAETTKRKTSSDDESEEDEDDLLQRTGNFISTSTSLPRG----------ILKMKNCQH 243

  Fly   367 RPPSDPAYGRPPPMPYDPHAH-VRTNGIPHPSALTGGKPAYSFHMNGEGS--LQPV---PFPPDA 425
            .....|...|...:.:.|.|. |...|:.:..:|        |.::|:.:  :|.:   .||   
Human   244 ANAERPTVARISSVQFHPGAQIVMVAGLDNAVSL--------FQVDGKTNPKIQSIYLERFP--- 297

  Fly   426 LVGVGIPRHARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGNKNPVSQLDCLQRD 490
                 |.:.....|    ||.|.|.:..:...|||.           ...|...||.|:..| ::
Human   298 -----IFKACFSAN----GEEVLATSTHSKVLYVYD-----------MLAGKLIPVHQVRGL-KE 341

  Fly   491 NYIRSVKLLPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSAAPACYALAISPDSKVCFSCCSD 555
            ..:||.::.|||..|::.|.|..|.:  ||..|..:...:....... |...|.|||..::...|
Human   342 KIVRSFEVSPDGSFLLINGIAGYLHL--LAMKTKELIGSMKINGRVA-ASTFSSDSKKVYASSGD 403

  Fly   556 GNIAVWDLHNEILVRQF--QGHTDGASCIDISPDGSRLWTGGLDNTVRSWDLREGRQLQQ----- 613
            |.:.|||:::...:.:|  :|...|.| |..|.:|..:..|.....|..::  :...||:     
Human   404 GEVYVWDVNSRKCLNRFVDEGSLYGLS-IATSRNGQYVACGSNCGVVNIYN--QDSCLQETNPKP 465

  Fly   614 ----HDFSSQIFSLGYCPTGDWLAVGME--NSHVEVLHASKPDKYQLHLHESCVLSLRFAACGKW 672
                .:..:.:.||.:.||.:.||:..|  ...|.::|.           .||.:...|      
Human   466 IKAIMNLVTGVTSLTFNPTTEILAIASEKMKEAVRLVHL-----------PSCTVFSNF------ 513

  Fly   673 FVSTGKDNLLNAWRTPYGASIFQSKETSSVLSCDISTDDKYIVTGSGDKKATVYEV 728
                               .:.::|..|.|.:.|.|....|...|:...||.:|.:
Human   514 -------------------PVIKNKNISHVHTMDFSPRSGYFALGNEKGKALMYRL 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
groNP_996298.1 TLE_N 11..124 CDD:397828
WD40 442..727 CDD:238121 66/297 (22%)
WD40 repeat 447..486 CDD:293791 9/38 (24%)
WD40 repeat 494..532 CDD:293791 12/37 (32%)
WD40 repeat 537..573 CDD:293791 11/37 (30%)
WD40 repeat 580..615 CDD:293791 8/43 (19%)
WD40 repeat 620..653 CDD:293791 9/34 (26%)
WD40 repeat 661..695 CDD:293791 1/33 (3%)
WD40 repeat 702..726 CDD:293791 7/23 (30%)
UTP18NP_057085.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70 14/54 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..143 10/37 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..219 3/25 (12%)
WD40 230..493 CDD:295369 67/310 (22%)
WD 1 249..288 9/46 (20%)
WD40 repeat 254..294 CDD:293791 8/47 (17%)
WD40 <270..554 CDD:225201 76/355 (21%)
WD 2 293..333 12/62 (19%)
WD40 repeat 299..338 CDD:293791 12/53 (23%)
WD 3 339..380 13/43 (30%)
WD40 repeat 344..380 CDD:293791 12/37 (32%)
WD 4 381..419 10/38 (26%)
WD40 repeat 388..421 CDD:293791 9/32 (28%)
WD 5 421..462 10/43 (23%)
WD40 repeat 428..470 CDD:293791 9/44 (20%)
WD 6 471..512 11/51 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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