DRSC/TRiP Functional Genomics Resources

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Protein Alignment gro and utp15

DIOPT Version :9

Sequence 1:NP_996298.1 Gene:gro / 43162 FlyBaseID:FBgn0001139 Length:730 Species:Drosophila melanogaster
Sequence 2:NP_001011103.1 Gene:utp15 / 496516 XenbaseID:XB-GENE-491403 Length:515 Species:Xenopus tropicalis


Alignment Length:223 Identity:55/223 - (24%)
Similarity:98/223 - (43%) Gaps:12/223 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   501 DGRTLIVGGEASNLSIWDLASPTPRIKAEL---TSAAPACYALAISPDSKVCFSCCSDGNIAVWD 562
            ||:.|..|.|.|.:.::|::.     ||.|   :..:.|.:.:..:.|.....|...|....:||
 Frog    91 DGKLLAAGCEDSVVQLFDISG-----KAALRQFSGHSKAVHFVDFTADKYRIVSGSDDYTSRLWD 150

  Fly   563 LHNEILVRQFQGHTDGASCIDISPDGSRLW-TGGLDNTVRSWDLREGRQLQQHDFSSQIFSLGYC 626
            :.|.:.:..:..|||...|...|...:.|: ||..|:|::.:|.|..:.:...|....:.|:...
 Frog   151 IPNGVEITSYNEHTDYIRCGCTSALNNDLFATGSYDHTIKIFDGRTDKSVMSMDHGQPVESVLLF 215

  Fly   627 PTGDWLAVGMENSHVEVLHASKPDKYQLHL--HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPY 689
            |:|. |.|.....:|:|....|..:..:.|  |...|.||..::.|:..:|...|..:..:.|..
 Frog   216 PSGG-LLVSAGGRYVKVWDILKGGQLLVSLRNHHKTVTSLCLSSSGQRLLSASLDRHVKVYSTMN 279

  Fly   690 GASIFQSKETSSVLSCDISTDDKYIVTG 717
            ...:......:|:||..::.||:.||.|
 Frog   280 YKVVHSFDYAASILSLALAPDDQMIVVG 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
groNP_996298.1 TLE_N 11..124 CDD:397828
WD40 442..727 CDD:238121 55/223 (25%)
WD40 repeat 447..486 CDD:293791
WD40 repeat 494..532 CDD:293791 10/33 (30%)
WD40 repeat 537..573 CDD:293791 6/35 (17%)
WD40 repeat 580..615 CDD:293791 9/35 (26%)
WD40 repeat 620..653 CDD:293791 8/32 (25%)
WD40 repeat 661..695 CDD:293791 7/33 (21%)
WD40 repeat 702..726 CDD:293791 7/16 (44%)
utp15NP_001011103.1 WD 1 36..75
WD40 repeat 41..79 CDD:293791
WD40 72..332 CDD:238121 55/223 (25%)
WD 2 78..117 10/30 (33%)
WD40 repeat 84..120 CDD:293791 10/33 (30%)
WD 3 120..159 7/38 (18%)
WD40 repeat 125..161 CDD:293791 6/35 (17%)
WD 4 162..202 12/39 (31%)
WD40 repeat 172..204 CDD:293791 8/31 (26%)
WD 5 204..242 9/38 (24%)
WD40 repeat 209..245 CDD:293791 8/36 (22%)
WD 6 246..285 8/38 (21%)
WD40 repeat 251..282 CDD:293791 7/30 (23%)
WD 7 287..326 8/21 (38%)
WD40 repeat 292..315 CDD:293791 7/16 (44%)
UTP15_C 344..491 CDD:312775
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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