DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gro and tle5

DIOPT Version :10

Sequence 1:NP_996298.1 Gene:gro / 43162 FlyBaseID:FBgn0001139 Length:730 Species:Drosophila melanogaster
Sequence 2:NP_956717.1 Gene:tle5 / 393395 ZFINID:ZDB-GENE-040426-1409 Length:197 Species:Danio rerio


Alignment Length:243 Identity:103/243 - (42%)
Similarity:136/243 - (55%) Gaps:47/243 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYPSPVRHPAAGGPPPQGPIKFTIADTLERIKEEFNFLQAQYHSIKLECEKLSNEKTEMQRHYVM 65
            |:|.. ||.|:     ...:|||.:|:.:|||:||.||||||||:||||:||::||:||||||:|
Zfish     2 MFPQS-RHSAS-----SQQLKFTTSDSCDRIKDEFQFLQAQYHSLKLECDKLASEKSEMQRHYIM 60

  Fly    66 YYEMSYGLNVEMHKQTEIAKRLNTLINQLLPFLQADHQQQVLQAVERAKQVTMQELNLIIGHQQQ 130
            |||||||||:|||||.||.||||.:..|:||:|..:||||||.|:|||||||..|:|.||..|.|
Zfish    61 YYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQEHQQQVLGAIERAKQVTPPEMNSIIRQQLQ 125

  Fly   131 HGIQQLLQQIHAQQVPGGPPQPMGALNPFGALGATMGLPHGPQGLLNKPPEHHRPDIKPTGLEGP 195
               ...|.|:....:| ..|.|:|...|.|....|     ...||.:              |...
Zfish   126 ---AHQLSQLQGLALP-MTPLPLGLSQPAGLPAVT-----SSSGLFS--------------LSSI 167

  Fly   196 AAAEERLRNSVSPADREKYRTRSPLDIENDSKRRKDEKLQEDEGEKSD 243
            .|::.:|..                  |:.|.|...:..:|::|:|||
Zfish   168 LASQAQLAK------------------EDKSTRETSDSHREEDGDKSD 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
groNP_996298.1 TLE_N 20..124 CDD:461094 72/103 (70%)
WD40 <443..728 CDD:441893
WD40 repeat 447..486 CDD:293791
WD40 repeat 494..532 CDD:293791
WD40 repeat 537..573 CDD:293791
WD40 repeat 580..615 CDD:293791
WD40 repeat 620..653 CDD:293791
WD40 repeat 661..695 CDD:293791
WD40 repeat 702..726 CDD:293791
tle5NP_956717.1 TLE_N 15..129 CDD:461094 76/116 (66%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.