DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gro and Tle1

DIOPT Version :9

Sequence 1:NP_996298.1 Gene:gro / 43162 FlyBaseID:FBgn0001139 Length:730 Species:Drosophila melanogaster
Sequence 2:XP_017175593.1 Gene:Tle1 / 21885 MGIID:104636 Length:822 Species:Mus musculus


Alignment Length:863 Identity:488/863 - (56%)
Similarity:562/863 - (65%) Gaps:174/863 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYPS---PVRHPAAGGPPPQG---PIKFTIADTLERIKEEFNFLQAQYHSIKLECEKLSNEKTEM 59
            |:|.   ||.|......|.|.   |.||||.::|:||||||.||||||||:|||||||::|||||
Mouse     1 MFPQSRHPVPHAGHLQTPHQAAGQPFKFTIPESLDRIKEEFQFLQAQYHSLKLECEKLASEKTEM 65

  Fly    60 QRHYVMYYEMSYGLNVEMHKQTEIAKRLNTLINQLLPFLQADHQQQVLQAVERAKQVTMQELNLI 124
            |||||||||||||||:||||||||||||||:..|::|||..:|||||.|||||||||||.|||.|
Mouse    66 QRHYVMYYEMSYGLNIEMHKQTEIAKRLNTICAQVIPFLSQEHQQQVAQAVERAKQVTMAELNAI 130

  Fly   125 IGHQQQHGIQQLLQQIHAQQVP--GGPPQPMGALNPFGALGATMGLPHGPQGLLNKPPEHHRPDI 187
            ||.:...|:....||:.||.:.  .|||.|:              .|| |.||  :|     |.|
Mouse   131 IGVRGLPGLPPTQQQLQAQHLSHGHGPPVPL--------------TPH-PSGL--QP-----PGI 173

  Fly   188 KPTG-------LEGPAAAEERL--RNSVSPADREKYRTRSP---------------------LDI 222
            .|.|       |....:.:..|  ::.....|.|::|.|.|                     .:.
Mouse   174 PPLGGSASLLALSSALSGQSHLAIKDDKKHHDAERHRDREPGTSNSLLVPDSLRGTDKRRNGPEF 238

  Fly   223 ENDSKRRK--DEKLQEDEGEKSDQDLVVDVANEMES-------HSPRPNGEHVSMEVRDRESLNG 278
            .:|.|:||  |:...:.:|:|||.:|||||:||..|       ||||.||            ::.
Mouse   239 SSDIKKRKVDDKDNYDSDGDKSDDNLVVDVSNEDPSSPHASPTHSPRENG------------IDK 291

  Fly   279 ERLEKPSSSGIKQERPPSRSGSSSSRSTPSLKTKDM---EKPGTPGAKARTPTPNAAAPAPGVN- 339
            .||.|..:||       |.:.::||.|:.|||:|::   ||..||..|:.||||.:..|.||.: 
Mouse   292 NRLLKKDASG-------SPASTASSGSSSSLKSKEVSLHEKANTPVLKSSTPTPRSDMPTPGTSA 349

  Fly   340 ----------PKQMMP------------------------------------------------- 345
                      |..|.|                                                 
Mouse   350 TPGLRPGLGKPPAMEPLVNQAGFGFHLELVPGSGKFGLKEKSWILSRKSSFEIKSAAGLRTPLAV 414

  Fly   346 QGPPPAGY--------------PGAPY--------QRPADPYQRPPSDPAYGRPPPMPYDPHAHV 388
            .||.||.:              |||.|        |..|.......:..||||.|.:.:||..|:
Mouse   415 PGPYPAPFGMVPHAGMNGELTSPGAAYAGLHSMSPQMSAAAAAAAAAVVAYGRSPMVGFDPPPHM 479

  Fly   389 RTNGI-PHPSALTGGKPAYSFHMNGEGSLQPVPFPPDALVGVGIPRHARQINTLSHGEVVCAVTI 452
            |...| |:.:.:.|||||||||:..:|.:||||||||||:|.||||||||||||:||||||||||
Mouse   480 RVPSIPPNLAGIPGGKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTI 544

  Fly   453 SNPTKYVYTGGKGCVKVWDISQPGNKNPVSQLDCLQRDNYIRSVKLLPDGRTLIVGGEASNLSIW 517
            ||||::|||||||||||||||.||||:||||||||.|||||||.||||||.|||||||||.||||
Mouse   545 SNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 609

  Fly   518 DLASPTPRIKAELTSAAPACYALAISPDSKVCFSCCSDGNIAVWDLHNEILVRQFQGHTDGASCI 582
            |||:|||||||||||:||||||||||||||||||||||||||||||||:.|||||||||||||||
Mouse   610 DLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI 674

  Fly   583 DISPDGSRLWTGGLDNTVRSWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSHVEVLHAS 647
            |||.||::||||||||||||||||||||||||||:||||||||||||:|||||||:|:|||||.:
Mouse   675 DISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVN 739

  Fly   648 KPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKETSSVLSCDISTDDK 712
            |||||||||||||||||:||.||||||||||||||||||||||||||||||:|||||||||.|||
Mouse   740 KPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDK 804

  Fly   713 YIVTGSGDKKATVYEVIY 730
            ||||||||||||||||||
Mouse   805 YIVTGSGDKKATVYEVIY 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
groNP_996298.1 TLE_N 11..124 CDD:397828 86/115 (75%)
WD40 442..727 CDD:238121 258/284 (91%)
WD40 repeat 447..486 CDD:293791 34/38 (89%)
WD40 repeat 494..532 CDD:293791 33/37 (89%)
WD40 repeat 537..573 CDD:293791 33/35 (94%)
WD40 repeat 580..615 CDD:293791 31/34 (91%)
WD40 repeat 620..653 CDD:293791 27/32 (84%)
WD40 repeat 661..695 CDD:293791 31/33 (94%)
WD40 repeat 702..726 CDD:293791 22/23 (96%)
Tle1XP_017175593.1 TLE_N 1..151 CDD:367727 99/149 (66%)
WD40 535..819 CDD:238121 258/283 (91%)
WD40 repeat 539..578 CDD:293791 34/38 (89%)
WD40 repeat 586..624 CDD:293791 33/37 (89%)
WD40 repeat 629..665 CDD:293791 33/35 (94%)
WD40 repeat 672..707 CDD:293791 31/34 (91%)
WD40 repeat 712..745 CDD:293791 27/32 (84%)
WD40 repeat 753..787 CDD:293791 31/33 (94%)
WD40 repeat 794..818 CDD:293791 22/23 (96%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 249 1.000 Domainoid score I2121
eggNOG 1 0.900 - - E1_KOG0639
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 890 1.000 Inparanoid score I389
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48578
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000904
OrthoInspector 1 1.000 - - otm42796
orthoMCL 1 0.900 - - OOG6_101214
Panther 1 1.100 - - O PTHR10814
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X487
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

Return to query results.
Submit another query.