Sequence 1: | NP_996298.1 | Gene: | gro / 43162 | FlyBaseID: | FBgn0001139 | Length: | 730 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_498555.1 | Gene: | B0280.9 / 175994 | WormBaseID: | WBGene00015104 | Length: | 429 | Species: | Caenorhabditis elegans |
Alignment Length: | 257 | Identity: | 48/257 - (18%) |
---|---|---|---|
Similarity: | 94/257 - (36%) | Gaps: | 48/257 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 376 RPPPMPYDPHAHVRTNGIPHPS---ALTG-GKPAYSFHMNGEGSLQPVPFPPDALVGVGIPRHAR 436
Fly 437 QINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGNKNPVSQLDCLQRDNYIRSVKLL-- 499
Fly 500 PDGRTLIVGGEASNLSIW---DLASPT-PRIKAELTSAAPACYALAISPDSKVCFSCCS--DGNI 558
Fly 559 AVWDLHNEILVRQF---QGHTDGASCIDISPDGSRLWTGGLDNTVRSWDLREGRQLQQHDFS 617 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
gro | NP_996298.1 | TLE_N | 11..124 | CDD:397828 | |
WD40 | 442..727 | CDD:238121 | 31/187 (17%) | ||
WD40 repeat | 447..486 | CDD:293791 | 7/38 (18%) | ||
WD40 repeat | 494..532 | CDD:293791 | 7/43 (16%) | ||
WD40 repeat | 537..573 | CDD:293791 | 5/40 (13%) | ||
WD40 repeat | 580..615 | CDD:293791 | 6/34 (18%) | ||
WD40 repeat | 620..653 | CDD:293791 | |||
WD40 repeat | 661..695 | CDD:293791 | |||
WD40 repeat | 702..726 | CDD:293791 | |||
B0280.9 | NP_498555.1 | WD40 | <66..424 | CDD:225201 | 46/252 (18%) |
WD40 repeat | 122..195 | CDD:293791 | |||
WD40 | 167..423 | CDD:295369 | 46/243 (19%) | ||
WD40 repeat | 168..207 | CDD:293791 | 1/2 (50%) | ||
WD40 repeat | 201..251 | CDD:293791 | 11/48 (23%) | ||
WD40 repeat | 258..296 | CDD:293791 | 11/60 (18%) | ||
WD40 repeat | 303..343 | CDD:293791 | 7/39 (18%) | ||
WD40 repeat | 350..388 | CDD:293791 | 4/37 (11%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |