DRSC/TRiP Functional Genomics Resources

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Protein Alignment gro and AgaP_AGAP009046

DIOPT Version :9

Sequence 1:NP_996298.1 Gene:gro / 43162 FlyBaseID:FBgn0001139 Length:730 Species:Drosophila melanogaster
Sequence 2:XP_319798.2 Gene:AgaP_AGAP009046 / 1280004 VectorBaseID:AGAP009046 Length:503 Species:Anopheles gambiae


Alignment Length:579 Identity:118/579 - (20%)
Similarity:204/579 - (35%) Gaps:161/579 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 GLEGPAAAEERLRNSVSPADREKYRTRSPLDIENDSKRRKDEKLQEDEGEKSDQDLVVDVANEME 255
            |.:..||.:.:.| ||..|..||...||.......||::......:..|.|.:::|         
Mosquito     2 GADKKAAGKSQDR-SVKKAKEEKGSVRSGKIKSKVSKKKAKASAIDQPGSKQEKEL--------- 56

  Fly   256 SHSPRPNGEHVSMEVRDRESL--NGERLEKPSSSGIKQERPPSRSG-SSSSRSTPSLK------T 311
                      :|:....::.|  |..:.||.|     .:..|::.| ...::.||..:      :
Mosquito    57 ----------MSLVFGGKDELVSNLTKSEKKS-----DKTDPAQGGKKKQAKQTPKKRRAVWHDS 106

  Fly   312 KDMEKPGTPGAKARTPTPNAAAPAPGVNPKQMMPQGPPP--AGYPGAPYQRPADPYQRPPSDPAY 374
            .|.::..|...|....|.:..       |:|:..:....  ....|.|.....|..:.|.||   
Mosquito   107 DDDDEEDTVNMKRNKFTYDEL-------PEQLTKERRRKQFEQIVGQPKWADLDRVREPDSD--- 161

  Fly   375 GRPPPMPYDPHAHVRTNGIPHPSALTGGKPAYSFH-MNGEGSLQPVPFPPDALVGVGIPRHARQI 438
                      ...::|.|                | :.|.|:.|            |:|:...::
Mosquito   162 ----------EEMLQTVG----------------HVVKGAGASQ------------GLPKGMIEL 188

  Fly   439 NTLSH--------GEVVCAVTIS-NPTKYV--YTGGKGCVKVWDISQPGNKNPVSQLDCLQRDNY 492
            ..|.:        |::.|   |: :||..|  .||.:|.|.:  ::..|.:|.......||:.. 
Mosquito   189 KKLKNLNRETKIEGKISC---INFHPTSMVAMMTGNRGLVSI--VAVDGVRNEKLHTLWLQKVR- 247

  Fly   493 IRSVKLLPDGRTLIVG-------------GEASNLSI-----WD------------LASPTPRIK 527
            |...:|.|||...|.|             |::..|.|     |.            |||.....:
Mosquito   248 ISCSRLSPDGNEAIFGSYRKFFHVYNLLSGQSDTLKIPERDTWQMKNFRISRCGKYLASVGECGE 312

  Fly   528 AELTSAAP-----------ACYALAISPDSKVCFSCCSDGNIAVWDLHNEILVRQFQ--GHTDGA 579
            ..|..|..           .|.:||.:|||:......:|..::|:.|..:.:|..||  |..:| 
Mosquito   313 VHLMDARTKDVLQTIQLRYTCQSLAFTPDSRYLLCHSNDTEVSVFSLEQKRIVNVFQDEGCVNG- 376

  Fly   580 SCIDISPDGSRLWTGGLDNTVRSWDLREGRQLQQ-------HDFSSQIFSLGYCPTGDWLAVG-- 635
            |||.|.|:|..:.||.....|..:.|......:|       ::.::.|.||.:..|.:.|.:.  
Mosquito   377 SCIAICPNGQFVATGSRQGIVNLYTLEVTLTEKQPVPVKTFNNLTTYIDSLAFNATSELLVIASS 441

  Fly   636 -MENSHVEVLHASKPD---KYQLHL-HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPY 689
             ::|: |.::|.....   .:.||: |...|.:..|:..|.:.....|.:.:..:|..:
Mosquito   442 TVKNA-VRLIHVKSRTVFRNFPLHMTHLGHVSAAEFSPLGGYLALGTKQSTVLLFRVKH 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
groNP_996298.1 TLE_N 11..124 CDD:397828
WD40 442..727 CDD:238121 71/316 (22%)
WD40 repeat 447..486 CDD:293791 11/41 (27%)
WD40 repeat 494..532 CDD:293791 14/67 (21%)
WD40 repeat 537..573 CDD:293791 10/35 (29%)
WD40 repeat 580..615 CDD:293791 11/41 (27%)
WD40 repeat 620..653 CDD:293791 8/38 (21%)
WD40 repeat 661..695 CDD:293791 5/29 (17%)
WD40 repeat 702..726 CDD:293791
AgaP_AGAP009046XP_319798.2 WD40 <177..498 CDD:225201 75/340 (22%)
WD40 repeat 204..243 CDD:293791 11/43 (26%)
WD40 237..498 CDD:295369 59/263 (22%)
WD40 repeat 249..292 CDD:293791 10/42 (24%)
WD40 repeat 297..328 CDD:293791 5/30 (17%)
WD40 repeat 333..371 CDD:293791 12/37 (32%)
WD40 repeat 377..419 CDD:293791 11/41 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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