DRSC/TRiP Functional Genomics Resources

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Protein Alignment gro and AgaP_AGAP009615

DIOPT Version :9

Sequence 1:NP_996298.1 Gene:gro / 43162 FlyBaseID:FBgn0001139 Length:730 Species:Drosophila melanogaster
Sequence 2:XP_318645.4 Gene:AgaP_AGAP009615 / 1278989 VectorBaseID:AGAP009615 Length:778 Species:Anopheles gambiae


Alignment Length:434 Identity:80/434 - (18%)
Similarity:134/434 - (30%) Gaps:160/434 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   445 EVVCAVTISNPTKYVYTGGK-GCVKVWDISQPGNKNPVSQLDCLQRDNYIRSVKLLPDGRTLIVG 508
            :|:....:||....:.:|.: |.:|:||    |.|:.|.::........|..:...|....:..|
Mosquito    68 DVIYTFAVSNTGNSIVSGHRSGLLKLWD----GEKHTVQKMWKTVHQGPISRLVFSPTDSVIASG 128

  Fly   509 GEASNLSIWDLASPTPRI-KAELTSAAPACYALAISP--DSKVCFSCCSDGNIAVWDLHNEILVR 570
            |..|.:.:||   ||.:: ...|..|......:...|  |||:..:...|..|..||..:...|:
Mosquito   129 GSDSTIRLWD---PTEQVCLGTLRGAEGLINVIVFHPDADSKIVVAVGDDTKIRAWDYESRKQVK 190

  Fly   571 QFQGHTDGASCIDISPDGSR-----------LWT-----------------------GGLDNTVR 601
            .|:||....:.:..|.|.:.           ||.                       .||...::
Mosquito   191 TFEGHFSRVTGVSFSEDRTHLVSAGRDKILILWNFESQQAVKTIPVYETLESVVVLPAGLRGLIK 255

  Fly   602 SWDL------------------REGRQLQQHDFSSQ------IFSLGY------CPTGDW----- 631
            .|::                  .||.....|.|.|:      :.|..:      |.:.|:     
Mosquito   256 VWEMTGAKIIFKQSNSLVAKAAEEGGLAITHLFYSEPHGRMAVVSADHNILVHDCESFDYVHQLS 320

  Fly   632 ---------LAVGMENSHVEVLHASKPDK-YQLHL--------HESCVLSLRFAACGKWFVSTGK 678
                     :..|..:.|:.:...|...| |.:..        |...||||  .|..::.:|:.|
Mosquito   321 GFSDEILDLILFGKRDQHIAMATNSSDFKVYDVSTMNCRLVKGHTDIVLSL--CANDRYLLSSSK 383

  Fly   679 DNLLNAW---RTPYGASI-----------------------------------------FQSKET 699
            ||.:..|   ..|:..|.                                         |.::|.
Mosquito   384 DNSIRLWSFTEEPFTISCVAIGLKHTNTVGCVTLSRQGGNFCASVSQDRCLKTWKIPKKFTTEED 448

  Fly   700 SSV--LSCD--------------ISTDDKYIVTGSGDKKATVYE 727
            ..:  |.|.              ||.:|:.|.|.|.||.|.:::
Mosquito   449 GELPRLQCSLTALAHEKDINCVTISPNDRLIATASQDKTAKLWD 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
groNP_996298.1 TLE_N 11..124 CDD:397828
WD40 442..727 CDD:238121 80/432 (19%)
WD40 repeat 447..486 CDD:293791 10/39 (26%)
WD40 repeat 494..532 CDD:293791 9/38 (24%)
WD40 repeat 537..573 CDD:293791 9/37 (24%)
WD40 repeat 580..615 CDD:293791 9/86 (10%)
WD40 repeat 620..653 CDD:293791 7/53 (13%)
WD40 repeat 661..695 CDD:293791 12/77 (16%)
WD40 repeat 702..726 CDD:293791 11/39 (28%)
AgaP_AGAP009615XP_318645.4 WD40 repeat 24..66 CDD:293791
WD40 60..587 CDD:225201 80/434 (18%)
WD40 67..391 CDD:238121 64/331 (19%)
WD40 repeat 70..108 CDD:293791 10/41 (24%)
WD40 repeat 114..150 CDD:293791 9/38 (24%)
WD40 repeat 155..193 CDD:293791 9/37 (24%)
WD40 repeat 200..235 CDD:293791 4/34 (12%)
WD40 repeat 240..269 CDD:293791 3/28 (11%)
WD40 316..618 CDD:238121 31/179 (17%)
WD40 repeat 413..462 CDD:293791 4/48 (8%)
WD40 repeat 467..503 CDD:293791 9/26 (35%)
WD40 repeat 510..545 CDD:293791
WD40 repeat 551..587 CDD:293791
Utp13 639..770 CDD:285789
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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