DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gro and Tle7

DIOPT Version :9

Sequence 1:NP_996298.1 Gene:gro / 43162 FlyBaseID:FBgn0001139 Length:730 Species:Drosophila melanogaster
Sequence 2:NP_001357768.1 Gene:Tle7 / 102638837 MGIID:5439433 Length:430 Species:Mus musculus


Alignment Length:432 Identity:141/432 - (32%)
Similarity:230/432 - (53%) Gaps:79/432 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 PYQRPADPYQRPPSDP-----AYGRPPPMP-----------------YDPHAHVRTNGIP----- 394
            |..||:...::|||..     ...|||..|                 :||||. .|:|:.     
Mouse    20 PTLRPSPASRKPPSTAHCAKCLLWRPPGPPSRDSQPVTEMHSMMQQQWDPHAQ-DTSGLQSMWFS 83

  Fly   395 ------------HPSALTG--------GKPAYSFHMNGEGSLQPV-PFPPDALVGVGIPRHARQI 438
                        .|...||        .:..:||       |:.: |.|.:|:|....|..:.::
Mouse    84 EAEPEGGTGSRFQPGDKTGQFSSPSLPNREVWSF-------LKAIPPIPDEAVVKQKSPCGSWRV 141

  Fly   439 NTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDIS--QPGNKNPVSQLDCLQRDNYIRSVKLLPD 501
            .||.||:.|.|:.||:...:|||.|.|.::|||.:  ...::.|.:|||.....|.:.:.||.||
Mouse   142 GTLRHGKRVNAIAISSAPCHVYTCGTGYIRVWDENALHASDRAPQAQLDFQDPRNRVLTCKLFPD 206

  Fly   502 GRTLIVGGEASNLSIWDLASPTPRIKAELTSAAPACYALAISPDSKVCFSCCSDGNIAVWDLHNE 566
            .::||.||.|..|::|||| |||:::|::.|....||:||:|.|:.:|.:... |.:.:||:.|:
Mouse   207 EQSLITGGMARGLTLWDLA-PTPQVRAQMASTGSICYSLALSSDAHLCLASFK-GFVEIWDVQNQ 269

  Fly   567 ILVRQFQGHTDGASCIDISPDGSRLWTGGLDNTVRSWDLREGRQLQQHDFSSQIFSLGYCPTGDW 631
            ||:|:.:.....:.|:||:  |.:.||||.|.|:.|||||..::||||....:|.|:.:.|:.:|
Mouse   270 ILIRKHEVPPYASRCVDIT--GFKFWTGGEDTTLYSWDLRSYQKLQQHSLCHEILSITHDPSEEW 332

  Fly   632 LAVGMENSHVEVLHASKPDKY--------QLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP 688
            :..|::.|.|.:|||.:.:||        |.|       :|:||:||.:|::| .|.:::....|
Mouse   333 VLAGLKMSDVVILHAHREEKYKAIVQRYTQHH-------NLKFASCGTYFMAT-LDEVIHCLAAP 389

  Fly   689 YGASIFQSKETSSVLSCDISTDDKYIVTGSGDKKATVYEVIY 730
            ....:||::|..::|.|::|:|::|:||||.| .||||:::|
Mouse   390 SLRRLFQAEECYNILCCEVSSDNRYLVTGSKD-SATVYQLLY 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
groNP_996298.1 TLE_N 11..124 CDD:397828
WD40 442..727 CDD:238121 110/294 (37%)
WD40 repeat 447..486 CDD:293791 15/40 (38%)
WD40 repeat 494..532 CDD:293791 18/37 (49%)
WD40 repeat 537..573 CDD:293791 14/35 (40%)
WD40 repeat 580..615 CDD:293791 18/34 (53%)
WD40 repeat 620..653 CDD:293791 12/40 (30%)
WD40 repeat 661..695 CDD:293791 9/33 (27%)
WD40 repeat 702..726 CDD:293791 12/23 (52%)
Tle7NP_001357768.1 WD40 <146..422 CDD:225201 107/288 (37%)
WD40 repeat 152..191 CDD:293791 14/38 (37%)
WD40 repeat 199..236 CDD:293791 18/37 (49%)
WD40 repeat 241..275 CDD:293791 14/34 (41%)
WD40 repeat 283..316 CDD:293791 18/34 (53%)
WD40 repeat 321..361 CDD:293791 12/39 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D546143at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10814
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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