DRSC/TRiP Functional Genomics Resources

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Protein Alignment gro and tle1

DIOPT Version :9

Sequence 1:NP_996298.1 Gene:gro / 43162 FlyBaseID:FBgn0001139 Length:730 Species:Drosophila melanogaster
Sequence 2:NP_001163974.1 Gene:tle1 / 100101799 XenbaseID:XB-GENE-868100 Length:780 Species:Xenopus tropicalis


Alignment Length:817 Identity:494/817 - (60%)
Similarity:565/817 - (69%) Gaps:124/817 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYPS---PVRHPAAGGPPPQGPIKFTIADTLERIKEEFNFLQAQYHSIKLECEKLSNEKTEMQRH 62
            |:|.   |..|.|||     .|.||||.::|:||||||.||||||||:|||||||::||||||||
 Frog     1 MFPQSRHPTPHQAAG-----QPFKFTIPESLDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRH 60

  Fly    63 YVMYYEMSYGLNVEMHKQTEIAKRLNTLINQLLPFLQADHQQQVLQAVERAKQVTMQELNLIIGH 127
            ||||||||||||:||||||||||||||:..|::|||..:|||||.|||||||||||.|||.|||.
 Frog    61 YVMYYEMSYGLNIEMHKQTEIAKRLNTICAQVIPFLSQEHQQQVAQAVERAKQVTMAELNAIIGV 125

  Fly   128 QQQHGIQQLLQQIHAQQV--PGGPPQPM----GALNPFG--ALGATMGL------PHGPQGLLNK 178
            :...|:....||:.||.:  ..|||.|:    ..|.|.|  .||::.||      ..|...|..|
 Frog   126 RGLPGLPPTQQQLQAQHLSHSHGPPVPLTPHPSGLQPQGIPPLGSSAGLLALSSALSGQSHLAMK 190

  Fly   179 ------PPEHHRPDIKPTGLEGPAAAEERLRNSVSPADREKYRTRSPLDIENDSKRR----KDEK 233
                  ..:||| |.:| |........|.||.:    |:   |...| |..||.|:|    ||..
 Frog   191 DDKKHHDSDHHR-DREP-GTSNSLLVSESLRGT----DK---RRNGP-DYSNDIKKRKIEDKDSS 245

  Fly   234 LQEDEGEKSDQDLVVDVANE-------MESHSPRPNGEHVSMEVRDRESLNGERLEKPSSSGIKQ 291
            ..:.:|:|||.:|||||:||       ..:||||.||            ::..||       :|:
 Frog   246 HYDSDGDKSDDNLVVDVSNEDPTSPRVSPAHSPRENG------------IDKSRL-------LKK 291

  Fly   292 ERPPSRSGSSSSRSTPSLKTKDM---EKPGTPGAKARTPTPNAAAPAPGVN-----------PKQ 342
            :...|.:.::||.|:.|||:|:|   ||..||..|:.||||....|.||.:           |..
 Frog   292 DASSSPASTASSGSSTSLKSKEMSLHEKASTPVLKSSTPTPRTDVPTPGTSVTSGLRPGLGKPPS 356

  Fly   343 MMP--------------------QGP----PPAGY------PGAPYQRPADPYQRPP-------- 369
            |.|                    .||    |.||.      |||.|   |..:...|        
 Frog   357 MDPLINQAAAAGLRTPLAVPGPYAGPFGMVPHAGMNGELTSPGAAY---ASLHNMSPHMSAAAAA 418

  Fly   370 SDPAYGRPPPMPYDPHAHVRTNGI-PHPSALTGGKPAYSFHMNGEGSLQPVPFPPDALVGVGIPR 433
            :..||||.|...:|...|:|..|: |:.:.:.|||||||||:..:|.:||||||||||:|.||||
 Frog   419 AVVAYGRSPMSGFDSPPHMRVPGMPPNLAGIPGGKPAYSFHVTADGQMQPVPFPPDALIGPGIPR 483

  Fly   434 HARQINTLSHGEVVCAVTISNPTKYVYTGGKGCVKVWDISQPGNKNPVSQLDCLQRDNYIRSVKL 498
            ||||||||:||||||||||||||::||||||||||||||||||||:||||||||.|||||||.||
 Frog   484 HARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKL 548

  Fly   499 LPDGRTLIVGGEASNLSIWDLASPTPRIKAELTSAAPACYALAISPDSKVCFSCCSDGNIAVWDL 563
            ||||.|||||||||.|||||||:|||||||||||:||||||||||||||||||||||||||||||
 Frog   549 LPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 613

  Fly   564 HNEILVRQFQGHTDGASCIDISPDGSRLWTGGLDNTVRSWDLREGRQLQQHDFSSQIFSLGYCPT 628
            ||:.||||||||||||||||||.||::||||||||||||||||||||||||||:|||||||||||
 Frog   614 HNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPT 678

  Fly   629 GDWLAVGMENSHVEVLHASKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI 693
            |:|||||||:|:|||||.:|||||||||||||||||:||.|||||||||||||||||||||||||
 Frog   679 GEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 743

  Fly   694 FQSKETSSVLSCDISTDDKYIVTGSGDKKATVYEVIY 730
            |||||:|||||||||.|||||||||||||||||||||
 Frog   744 FQSKESSSVLSCDISIDDKYIVTGSGDKKATVYEVIY 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
groNP_996298.1 TLE_N 11..124 CDD:397828 86/112 (77%)
WD40 442..727 CDD:238121 259/284 (91%)
WD40 repeat 447..486 CDD:293791 35/38 (92%)
WD40 repeat 494..532 CDD:293791 33/37 (89%)
WD40 repeat 537..573 CDD:293791 33/35 (94%)
WD40 repeat 580..615 CDD:293791 31/34 (91%)
WD40 repeat 620..653 CDD:293791 27/32 (84%)
WD40 repeat 661..695 CDD:293791 31/33 (94%)
WD40 repeat 702..726 CDD:293791 22/23 (96%)
tle1NP_001163974.1 TLE_N 1..143 CDD:281857 99/146 (68%)
WD40 <486..778 CDD:225201 266/291 (91%)
WD40 493..777 CDD:238121 259/283 (92%)
WD40 repeat 497..536 CDD:293791 35/38 (92%)
WD40 repeat 544..582 CDD:293791 33/37 (89%)
WD40 repeat 587..623 CDD:293791 33/35 (94%)
WD40 repeat 630..665 CDD:293791 31/34 (91%)
WD40 repeat 670..703 CDD:293791 27/32 (84%)
WD40 repeat 711..745 CDD:293791 31/33 (94%)
WD40 repeat 752..776 CDD:293791 22/23 (96%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 249 1.000 Domainoid score I2081
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 905 1.000 Inparanoid score I367
OMA 1 1.010 - - QHG48578
OrthoDB 1 1.010 - - D251248at33208
OrthoFinder 1 1.000 - - FOG0000904
OrthoInspector 1 1.000 - - otm47907
Panther 1 1.100 - - O PTHR10814
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X487
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.080

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