DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m8-HLH and her4.5

DIOPT Version :10

Sequence 1:NP_524513.1 Gene:E(spl)m8-HLH / 43161 FlyBaseID:FBgn0000591 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_571165.3 Gene:her4.5 / 30301 ZFINID:ZDB-GENE-081031-106 Length:152 Species:Danio rerio


Alignment Length:175 Identity:42/175 - (24%)
Similarity:76/175 - (43%) Gaps:36/175 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KTQIYQKVKKPMLERQRRARMNKCLDNLKTLVA-ELRGDDGILRMDKAEMLESAVIFMRQQKTPK 69
            :|.:..|::|||:|:.||.|:|..::.||||:| |........|.:||::||..:.|:|:     
Zfish    13 ETLLTNKLRKPMVEKIRRERINSSIEKLKTLLAQEFVKQQPDSRQEKADILEMTLDFLRR----- 72

  Fly    70 KVAQEEQSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGRVYKNLQQFHEAQSAAD 134
               .::.|...|........||:.:|:....|..         .|.|.:::.::|...:..:..|
Zfish    73 ---SQKSSAAGDGRSRCVQEAVSFLSQCPVQTQS---------HTRLMKLFLHMQTPADQHTRVD 125

  Fly   135 FIQNSMDCSSMDKAPLSPASSGYHSDCDSPAPSPQPMQQPLWRPW 179
                            :|.::..|:  :|.|....|....:||||
Zfish   126 ----------------NPQTTETHA--NSSAKQHTPAHSHIWRPW 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m8-HLHNP_524513.1 bHLH-O_ESM5_like 12..70 CDD:381486 22/58 (38%)
ORANGE 81..125 CDD:128787 7/43 (16%)
her4.5NP_571165.3 bHLH-O_HES5 19..77 CDD:381467 22/65 (34%)
ORANGE 77..123 CDD:128787 9/54 (17%)

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