DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m8-HLH and her3

DIOPT Version :10

Sequence 1:NP_524513.1 Gene:E(spl)m8-HLH / 43161 FlyBaseID:FBgn0000591 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_571155.1 Gene:her3 / 30289 ZFINID:ZDB-GENE-980526-204 Length:229 Species:Danio rerio


Alignment Length:225 Identity:55/225 - (24%)
Similarity:94/225 - (41%) Gaps:54/225 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TTKTQIYQKVKKPMLERQRRARMNKCLDNLKTLVAELRGDDGI--LRMDKAEMLESAVIFMRQ-Q 65
            |.|.|..:||.||::|::||||:||||:.||:|: |....:.|  .:::||::||..|..:|. |
Zfish    10 TAKPQNVKKVSKPLMEKKRRARINKCLNQLKSLL-ESACSNNIRKRKLEKADILELTVKHLRHLQ 73

  Fly    66 KTPKKVAQEEQSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHL--GRVYKNLQQF-- 126
            .|.:.:::...|.   .:..||.:.:|.||..:.:: ....|....::|:|  |..:..:..|  
Zfish    74 NTKRGLSKACDSA---EYHAGYRSCLNTVSHYLRAS-DTDRDSRSIMLTNLTSGLNHNRVPDFST 134

  Fly   127 ------------------HEAQSAADFIQNSMDCSSMDKAPLSPASSGY-HSD---CDSPAPSPQ 169
                              |:.....|...:|...::..|..|.|..:.. .||   .|:...|.:
Zfish   135 VESDPALIFTLPSTLRRPHKVPIRTDVSYSSFQQTAERKVCLMPKRTEIGDSDRMSLDAALRSQE 199

  Fly   170 P--------------------MQQPLWRPW 179
            .                    .:|..||||
Zfish   200 SKKAETTHFRPKDLKVIECCIFKQNYWRPW 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m8-HLHNP_524513.1 bHLH-O_ESM5_like 12..70 CDD:381486 26/60 (43%)
ORANGE 81..125 CDD:128787 9/45 (20%)
her3NP_571155.1 bHLH_SF 24..78 CDD:469605 22/54 (41%)
ORANGE 88..129 CDD:128787 9/41 (22%)

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