DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m8-HLH and hes5.4

DIOPT Version :9

Sequence 1:NP_524513.1 Gene:E(spl)m8-HLH / 43161 FlyBaseID:FBgn0000591 Length:179 Species:Drosophila melanogaster
Sequence 2:XP_002933895.2 Gene:hes5.4 / 100271766 XenbaseID:XB-GENE-5952810 Length:159 Species:Xenopus tropicalis


Alignment Length:184 Identity:37/184 - (20%)
Similarity:71/184 - (38%) Gaps:50/184 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TKTQIYQKVKKPMLERQRRARMNKCLDNLKTLV-AELRGDDGILRMDKAEMLESAVIFMRQQKTP 68
            :||.:.| ::||::|:.||.|:|..:..|:.|: .|.:......:::||::||..|.::::.:..
 Frog    17 SKTSLRQ-IRKPVVEKMRRDRINSSIKQLRMLLEKEFQRHQPNSKLEKADILEMTVNYLKEHQLQ 80

  Fly    69 KKVAQEEQSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGRVYKNLQQFHEAQSAA 133
            .......:..|...:..||...:.|..:.::.|. |.......::.|..|..             
 Frog    81 MNAVAFARKSPFQDYNQGYSRCLEETLQFLSHTE-MQKPANLKLVQHFNRTV------------- 131

  Fly   134 DFIQNSMDCSSMDKAPLSPASSGYHSDCDSPAPSPQP-MQQP-------LWRPW 179
                              ||        |:..|...| ::||       :||||
 Frog   132 ------------------PA--------DNNLPQGAPSLKQPSSNTAAIIWRPW 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m8-HLHNP_524513.1 HLH 10..67 CDD:238036 16/57 (28%)
ORANGE 81..125 CDD:128787 7/43 (16%)
hes5.4XP_002933895.2 bHLH-O_HES5 23..81 CDD:381467 16/58 (28%)
Hairy_orange 93..129 CDD:413415 6/36 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1378299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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