DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m8-HLH and hes5.4

DIOPT Version :10

Sequence 1:NP_524513.1 Gene:E(spl)m8-HLH / 43161 FlyBaseID:FBgn0000591 Length:179 Species:Drosophila melanogaster
Sequence 2:XP_002933895.2 Gene:hes5.4 / 100271766 XenbaseID:XB-GENE-5952810 Length:159 Species:Xenopus tropicalis


Alignment Length:151 Identity:32/151 - (21%)
Similarity:41/151 - (27%) Gaps:75/151 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 WGYLCHFSYT-----TLKDAPVQEDGKEDLPWYKRVNLGENKYRNGIAIMCFFIGYGVLFASWMF 84
            ||.    |:|     :|...|..||..||          |:.|.|.        ||.|:...   
 Frog   128 WG
P----SWTRLTPVSLPPEPACEDADED----------EDDYHNP--------GYLVVLPD--- 167

  Fly    85 TLRSVRYLVLRKGGDKVSVVTYAP--------------FGTNRIMDVPLKYVSAQESREAARVTV 135
                          ...:..|.||              |....|.|    ||:..||.|:|..: 
 Frog   168 --------------STPATSTAAPSAPALSTPGIRDSAFSMESIDD----YVNVPESGESAEAS- 213

  Fly   136 PVKIKNRALFYMLDMRGEFTN 156
                        ||...|:.|
 Frog   214 ------------LDGSREYVN 222

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
E(spl)m8-HLHNP_524513.1 bHLH-O_ESM5_like 12..70 CDD:381486 13/49 (27%)
ORANGE 81..125 CDD:128787 8/57 (14%)
hes5.4XP_002933895.2 bHLH-O_HES5 23..81 CDD:381467