DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m8-HLH and her4.2

DIOPT Version :9

Sequence 1:NP_524513.1 Gene:E(spl)m8-HLH / 43161 FlyBaseID:FBgn0000591 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001154881.1 Gene:her4.2 / 100148329 ZFINID:ZDB-GENE-060815-1 Length:152 Species:Danio rerio


Alignment Length:175 Identity:42/175 - (24%)
Similarity:77/175 - (44%) Gaps:36/175 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KTQIYQKVKKPMLERQRRARMNKCLDNLKTLVA-ELRGDDGILRMDKAEMLESAVIFMRQQKTPK 69
            :|.:..|::|||:|:.||.|:|..::.||||:| |........|.:||::||..:.|:|:     
Zfish    13 ETLLTNKLRKPMVEKIRRERINSSIEKLKTLLAQEFIKQQPDSRQEKADILEMTLDFLRR----- 72

  Fly    70 KVAQEEQSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGRVYKNLQQFHEAQSAAD 134
               .::.|...|........||:.:|:....|..         .|.|.:::.::|...:..:..|
Zfish    73 ---SQKSSAAGDGRSRCVQEAVSFLSQCPVQTQS---------HTRLMKLFLHMQTPADQHTRVD 125

  Fly   135 FIQNSMDCSSMDKAPLSPASSGYHSDCDSPAPSPQPMQQPLWRPW 179
                            :|.::..|:  :|.|....|.:..:||||
Zfish   126 ----------------NPQTTETHA--NSSAKQHTPARSHIWRPW 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m8-HLHNP_524513.1 HLH 10..67 CDD:238036 22/57 (39%)
ORANGE 81..125 CDD:128787 7/43 (16%)
her4.2NP_001154881.1 HLH 19..75 CDD:238036 22/63 (35%)
ORANGE 77..123 CDD:128787 9/54 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573761
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1378299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.850

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