DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m7-HLH and her2

DIOPT Version :10

Sequence 1:NP_536753.1 Gene:E(spl)m7-HLH / 43160 FlyBaseID:FBgn0002633 Length:186 Species:Drosophila melanogaster
Sequence 2:XP_073771585.1 Gene:her2 / 30300 ZFINID:ZDB-GENE-980526-274 Length:133 Species:Danio rerio


Alignment Length:176 Identity:49/176 - (27%)
Similarity:74/176 - (42%) Gaps:63/176 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KVMKPLLERKRRARINKCLDELKDLM-AECVAQTGDAKFEKADILEVTVQHLRKLKESKKHVPAN 78
            |:.||::|:.||.|||||:::||.|: .|..|....:|.|||||||:.|.:|:...::  |..:.
Zfish    17 KLRKPVVEKMRRDRINKCIEQLKILLKTEIKASQPCSKLEKADILEMAVIYLKNTADA--HARSY 79

  Fly    79 PE---QSFRAGYIRAANEVSRALASLPRVDVAFGTTLMTHLGMRLNQLEQPMEQPQAVNTPLSIV 140
            .|   ||:..||.|...|.:|.|::              |            :|.|..:.|:   
Zfish    80 SEAHAQSYADGYSRCIEETARFLSA--------------H------------KQTQKHSKPV--- 115

  Fly   141 CGSSSSSSTYSSASSCSSISPVSSGYASDNESLLQISSPGQVWRPW 186
                         .||...|              :|:..| :||||
Zfish   116 -------------DSCQITS--------------EIAKHG-LWRPW 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m7-HLHNP_536753.1 bHLH-O_ESMB_like 7..73 CDD:381584 26/58 (45%)
ORANGE 81..125 CDD:128787 9/43 (21%)
her2XP_073771585.1 None

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