DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m7-HLH and ref-1

DIOPT Version :10

Sequence 1:NP_536753.1 Gene:E(spl)m7-HLH / 43160 FlyBaseID:FBgn0002633 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_496204.1 Gene:ref-1 / 174585 WormBaseID:WBGene00004334 Length:367 Species:Caenorhabditis elegans


Alignment Length:223 Identity:48/223 - (21%)
Similarity:81/223 - (36%) Gaps:69/223 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RKVMKPLLERKRRARINKCLDELKDLMAECVAQTGD--AKFEKADILEVTVQHLRKLKESKKH-- 74
            ||.:|...|:.||.|..:..|.||:.:.|....|..  .|.::.:.|::.:.::    ::|||  
 Worm   163 RKEVKKNREQDRRDRQGEAFDALKNFIIENKLMTSHQVEKMQRLNTLDIIIAYI----QNKKHNF 223

  Fly    75 -VPANPEQSFRAGYIRAANEVSRALA-SLPRVDVAFGTTLMTHLGMRLNQLEQ------------ 125
             ..::.|||..|..|....:.::.:| ...:.|        .||.:|...||:            
 Worm   224 VSRSDQEQSLYAHAIAEGKKTAKNIAFQFFKSD--------RHLVVRCADLEKFFEFSLSPKPLF 280

  Fly   126 -------------------------PMEQPQAVNTPLSIVCGSSSSSSTY-------SSASSCSS 158
                                     ||.......:|      .|..|.:|       ||.:|.||
 Worm   281 GFPSMPIPIPPPSFPIFPFRPFPFFPMPMAPMATSP------KSQQSPSYSLDSPPPSSDTSSSS 339

  Fly   159 ISPVSSGYASDNESLLQISSPGQVWRPW 186
            |...|:...:.| |..:.|...:::|||
 Worm   340 IETPSTPNENSN-SNPKASRKSKLFRPW 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m7-HLHNP_536753.1 bHLH-O_ESMB_like 7..73 CDD:381584 14/60 (23%)
ORANGE 81..125 CDD:128787 10/44 (23%)
ref-1NP_496204.1 HLH 20..66 CDD:197674
HLH 170..217 CDD:197674 11/50 (22%)
Blue background indicates that the domain is not in the aligned region.

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