DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E(spl)m7-HLH and Hes5

DIOPT Version :9

Sequence 1:NP_536753.1 Gene:E(spl)m7-HLH / 43160 FlyBaseID:FBgn0002633 Length:186 Species:Drosophila melanogaster
Sequence 2:XP_006538625.3 Gene:Hes5 / 15208 MGIID:104876 Length:415 Species:Mus musculus


Alignment Length:205 Identity:49/205 - (23%)
Similarity:85/205 - (41%) Gaps:40/205 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EMSKTYQYRKVMKPLLERKRRARINKCLDELKDLM-AECVAQTGDAKFEKADILEVTVQHLRKLK 69
            ||....:..::.||::|:.||.|||..:::||.|: .|......::|.|||||||:.|.:|:..|
Mouse   227 EMLSPKEKNRLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPNSKLEKADILEMAVSYLKHSK 291

  Fly    70 E-----SKKHVPANPEQSFRAGYIRAANEVSRALASLPR---VDVAFG-----------TTLM-- 113
            .     ::..:||:...:.||..:......:.|.|:.|:   .|.:.|           .||.  
Mouse   292 GEPGACARLLLPADVAPTARAPLMPLRLPTAFAAAAGPKSLHQDYSEGYSWCLQEAVQFLTLHAA 356

  Fly   114 --THLGMRLNQLEQPMEQPQAVNTPLSIVCGSSSSSSTYSSASSCSSISPVSSGYASDNESLLQI 176
              |.:.:..:....|.....|...|........:.||..::|::.|:....:.|           
Mouse   357 SDTQMKLLYHFQRPPAPAAPAKEPPAPGAAPQPARSSAKAAAAAVSTSRQPACG----------- 410

  Fly   177 SSPGQVWRPW 186
                 :||||
Mouse   411 -----LWRPW 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m7-HLHNP_536753.1 HLH 13..73 CDD:238036 23/65 (35%)
ORANGE 81..125 CDD:128787 10/61 (16%)
Hes5XP_006538625.3 bHLH-O_HES5 236..292 CDD:381467 22/55 (40%)
ORANGE 334..369 CDD:128787 5/34 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167830910
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1011
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.