DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E(spl)m5-HLH and hes7

DIOPT Version :10

Sequence 1:NP_524511.1 Gene:E(spl)m5-HLH / 43158 FlyBaseID:FBgn0002631 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001039166.1 Gene:hes7 / 733997 XenbaseID:XB-GENE-876465 Length:178 Species:Xenopus tropicalis


Alignment Length:184 Identity:47/184 - (25%)
Similarity:84/184 - (45%) Gaps:30/184 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAIL--RMDKAEMLEAALVFMR-KQ 73
            |...:.:.|:.|||:||:||.|:|..|:.|:..:::....:.:.  :::|||:||..:.|:: .:
 Frog     7 VRPMEAHRKLLKPLVERRRRERINNSLEKLRIFLSQALKSEKLKNPKVEKAEILECTVQFLQSSK 71

  Fly    74 VVKQQAPVSPLPMDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQRMLQADQVQTS 138
            :|.|...|.   ...:::|:.:.:......|...|.::| ..|..::|     |........:..
 Frog    72 LVPQDGDVG---NKGYQSGFQHCLETALHFMNSKPDLNV-ATKDFLSH-----QLSSYKPPAEAW 127

  Fly   139 VTTSTPRPLSPASSGYH------SDNEDSQSAA--------SPKPVEETMWRPW 178
            ..|.||:| :| |.||.      |.|..|.|..        ||:..:  .||||
 Frog   128 SPTDTPKP-TP-SIGYQDSAPHLSSNTISVSPTKTLVDGQFSPQTFQ--TWRPW 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m5-HLHNP_524511.1 bHLH-O_ESM5_like 20..78 CDD:381486 19/60 (32%)
ORANGE 87..131 CDD:128787 7/43 (16%)
hes7NP_001039166.1 bHLH-O_HES7 14..74 CDD:381468 18/59 (31%)
Hairy_orange 84..121 CDD:462193 7/42 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..147 8/26 (31%)
WRPW motif. /evidence=ECO:0000255 174..177 2/2 (100%)

Return to query results.
Submit another query.