DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E(spl)m5-HLH and Hes6

DIOPT Version :9

Sequence 1:NP_524511.1 Gene:E(spl)m5-HLH / 43158 FlyBaseID:FBgn0002631 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_062352.1 Gene:Hes6 / 55927 MGIID:1859852 Length:224 Species:Mus musculus


Alignment Length:206 Identity:55/206 - (26%)
Similarity:88/206 - (42%) Gaps:55/206 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KVKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAILRMDKAEMLE-------AALVFMRKQVVKQ 77
            |.:|||:|::||||:|:.|..|:.|:|   |.:...:::.||:||       .||....::..:.
Mouse    27 KARKPLVEKKRRARINESLQELRLLLA---GTEVQAKLENAEVLELTVRRVQGALRGRAREREQL 88

  Fly    78 QAPVSPLPMDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHL--------GVEFQRMLQADQ 134
            ||..|    :.|..||:..:.|:...::...|:...|...::.||        |..||.:| .|.
Mouse    89 QAEAS----ERFAAGYIQCMHEVHTFVSTCQAIDATVSAELLNHLLESMPLREGSSFQDLL-GDS 148

  Fly   135 VQ----TSVTTSTP---RPLSPASS------GYHSDNEDSQSAASPK-PVE-------------- 171
            :.    .|..:|.|   .|.||.||      ...||.|:...|...: |.|              
Mouse   149 LAGLPGGSGRSSWPPGGSPESPLSSPPGPGDDLCSDLEEIPEAELNRVPAEGPDLVSTSLGSLTA 213

  Fly   172 ----ETMWRPW 178
                :::||||
Mouse   214 ARRAQSVWRPW 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m5-HLHNP_524511.1 HLH 20..72 CDD:238036 21/58 (36%)
ORANGE 87..131 CDD:128787 11/51 (22%)
Hes6NP_062352.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 1/3 (33%)
bHLH_SF 24..81 CDD:412148 21/56 (38%)
Hairy_orange 96..134 CDD:400076 8/37 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 146..209 15/62 (24%)
WRPW motif 221..224 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167830824
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4304
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.700

Return to query results.
Submit another query.