DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m5-HLH and Helt

DIOPT Version :10

Sequence 1:NP_524511.1 Gene:E(spl)m5-HLH / 43158 FlyBaseID:FBgn0002631 Length:178 Species:Drosophila melanogaster
Sequence 2:XP_008769494.1 Gene:Helt / 498633 RGDID:1564073 Length:241 Species:Rattus norvegicus


Alignment Length:173 Identity:37/173 - (21%)
Similarity:68/173 - (39%) Gaps:23/173 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAILRMDKAEMLEAALVFMRK------QVVKQQA 79
            |...::|::||.|:|:||:.|...|.......:..:::|||:||..:.::|.      ...:::|
  Rat    13 VSHKVIEKRRRDRINRCLNELGKTVPMALAKQSSGKLEKAEILEMTVQYLRALHSADFPRGREKA 77

  Fly    80 PVSPLPMDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQRMLQADQVQTSVTTSTP 144
            .:.....:.|..||...:..:...:.....|.....|.......::.:..|.|:.....:  |.|
  Rat    78 ELLAEFANYFHYGYHECMKNLVHYLTTVERMETKDTKYARILAFLQSKARLGAEPAFPPL--SLP 140

  Fly   145 RP-----LSPASSGY--HSDNEDS--QSAASPKPVEETMWRPW 178
            .|     |.||...:  ||..|.:  ...|:|...      ||
  Rat   141 EPDFSYQLHPAGPEFPGHSPGEATVFPQGATPGSF------PW 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m5-HLHNP_524511.1 bHLH-O_ESM5_like 20..78 CDD:381486 16/62 (26%)
ORANGE 87..131 CDD:128787 5/43 (12%)
HeltXP_008769494.1 bHLH-O_HELT 14..69 CDD:381414 15/54 (28%)
Hairy_orange 86..127 CDD:462193 5/40 (13%)
DUF1373 129..>213 CDD:462093 14/57 (25%)

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