DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m5-HLH and her11

DIOPT Version :10

Sequence 1:NP_524511.1 Gene:E(spl)m5-HLH / 43158 FlyBaseID:FBgn0002631 Length:178 Species:Drosophila melanogaster
Sequence 2:XP_073777454.1 Gene:her11 / 445409 ZFINID:ZDB-GENE-040824-4 Length:388 Species:Danio rerio


Alignment Length:168 Identity:40/168 - (23%)
Similarity:82/168 - (48%) Gaps:22/168 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PQSNNSTTF-VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAIL--RMDKAEMLE 64
            |:..::.|| ::||:...:..||::|::||.|:|..||.|:.|:.:...|..:.  :::|||:|:
Zfish   113 PRMKSTPTFNMTKTEGIKRRLKPVIEKKRRDRINHNLDALRDLLFKNTADTRLQNPKLEKAEILD 177

  Fly    65 AALVFMRKQVVKQQAPVSPLPMD--SFKNGYMNAVSEISRVMACTPAMSVDVGK--------TVM 119
            .|:.:::|.:.|.:...:...||  |.:|.::        :....|..:.|..:        .|:
Zfish   178 LAVQYIKKTIRKTETARNSNQMDCKSTQNQFV--------ISPAGPLYTSDYCRRFKTSEQNEVL 234

  Fly   120 THLGVEFQRMLQADQVQTSVTTSTPRPLSPASSGYHSD 157
            .:|||. |.:..:.:....:.:.....|||....||.:
Zfish   235 LNLGVS-QNLSGSSKTGNKLVSQKGFLLSPPGQNYHQE 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m5-HLHNP_524511.1 bHLH-O_ESM5_like 20..78 CDD:381486 19/59 (32%)
ORANGE 87..131 CDD:128787 10/53 (19%)
her11XP_073777454.1 None

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