DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m5-HLH and E(spl)mgamma-HLH

DIOPT Version :10

Sequence 1:NP_524511.1 Gene:E(spl)m5-HLH / 43158 FlyBaseID:FBgn0002631 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_524504.2 Gene:E(spl)mgamma-HLH / 43151 FlyBaseID:FBgn0002735 Length:205 Species:Drosophila melanogaster


Alignment Length:203 Identity:72/203 - (35%)
Similarity:107/203 - (52%) Gaps:42/203 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTLVA---EFQGDDAILRMDKAEMLEAALVFMRKQ 73
            :|||..|.||.||:|||:||||:|||||.||.|:.   |.:|:. :.|::||::||..:..::| 
  Fly     9 MSKTYQYRKVMKPMLERKRRARINKCLDELKDLMVATLESEGEH-VTRLEKADILELTVTHLQK- 71

  Fly    74 VVKQQ-------APVSPLPMDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQRMLQ 131
             :|||       ...|..|.:.|::||::||:|:||.::..|.|:|.:|..:|||||   ||:.|
  Fly    72 -MKQQRQHKRASGDESLTPAEGFRSGYIHAVNEVSRSLSQLPGMNVSLGTQLMTHLG---QRLNQ 132

  Fly   132 ADQVQTSVTTSTPR-------------PLSPASSGYHSDNEDSQSAA-------------SPKPV 170
            ....:..|...|..             |:||.||...|.|.::.|.:             .....
  Fly   133 IQPAEKEVLPVTAPLSVHIANRDAYSVPISPISSYAGSPNSNTSSTSHSLLTTIDVTKMEDDSED 197

  Fly   171 EETMWRPW 178
            ||.:||||
  Fly   198 EENVWRPW 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m5-HLHNP_524511.1 bHLH-O_ESM5_like 20..78 CDD:381486 28/60 (47%)
ORANGE 87..131 CDD:128787 19/43 (44%)
E(spl)mgamma-HLHNP_524504.2 bHLH-O_ESMB_like 9..77 CDD:381584 34/70 (49%)
ORANGE 91..135 CDD:128787 20/46 (43%)

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