DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m5-HLH and her12

DIOPT Version :10

Sequence 1:NP_524511.1 Gene:E(spl)m5-HLH / 43158 FlyBaseID:FBgn0002631 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_991182.1 Gene:her12 / 402914 ZFINID:ZDB-GENE-040824-5 Length:155 Species:Danio rerio


Alignment Length:184 Identity:49/184 - (26%)
Similarity:83/184 - (45%) Gaps:35/184 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAPQSNNSTTFVSKTQHY-----LKVKKPLLERQRRARMNKCLDTLKTLV-AEFQGDDAILRMDK 59
            |||.|....:|  ...|:     :|::||::|:.||.|:|.|:|.||:|: .||...|...:::|
Zfish     1 MAPHSATLASF--DHLHFSDKEKIKLRKPIVEKMRRDRINTCIDQLKSLLEKEFHSHDPSTKLEK 63

  Fly    60 AEMLEAALVFMRKQVVKQQAPVSPLPMDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGV 124
            |::||..:.|:::|:.:||    .:|...|..||.:...|....:    ::..:.|:....|.|.
Zfish    64 ADILEMTVSFLKQQIKQQQ----QIPQRDFNEGYSHCWRESVHFL----SLHSNAGELQHLHSGP 120

  Fly   125 EFQRMLQADQVQTSVTTSTPRPLSPASSGYHSDNEDSQSAASPKPVEETMWRPW 178
            :          ..|...|||.......:.....:.||..|         :||||
Zfish   121 K----------TNSTMGSTPATACSKLNTAALQHPDSVRA---------VWRPW 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m5-HLHNP_524511.1 bHLH-O_ESM5_like 20..78 CDD:381486 22/58 (38%)
ORANGE 87..131 CDD:128787 7/43 (16%)
her12NP_991182.1 bHLH-O_HES5 23..74 CDD:381467 20/50 (40%)

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