DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E(spl)m5-HLH and hry

DIOPT Version :10

Sequence 1:NP_524511.1 Gene:E(spl)m5-HLH / 43158 FlyBaseID:FBgn0002631 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_523977.2 Gene:hry / 38995 FlyBaseID:FBgn0001168 Length:337 Species:Drosophila melanogaster


Alignment Length:156 Identity:48/156 - (30%)
Similarity:80/156 - (51%) Gaps:20/156 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KPLLERQRRARMNKCLDTLKTLVAEFQGDDAI--LRMDKAEMLEAALVFM----RKQVVKQQAPV 81
            ||::|::||||:|.||:.||||:.:....|..  .:::||::||..:..:    |:|...||| .
  Fly    36 KPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQELQRQQAAMQQA-A 99

  Fly    82 SPLPMDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHL-----GVEFQRMLQADQVQTSVTT 141
            .|..::.||.|:.:.|:|:||.....||..    :.::.||     ||:.:...|..|.|.....
  Fly   100 DPKIVNKFKAGFADCVNEVSRFPGIEPAQR----RRLLQHLSNCINGVKTELHQQQRQQQQQSIH 160

  Fly   142 STPRPLSPASSGYHSDNEDSQSAASP 167
            :...|..|:|    .:.:..|.||:|
  Fly   161 AQMLPSPPSS----PEQDSQQGAAAP 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m5-HLHNP_524511.1 bHLH-O_ESM5_like 20..78 CDD:381486 21/60 (35%)
ORANGE 87..131 CDD:128787 13/48 (27%)
hryNP_523977.2 bHLH-O_hairy_like 30..88 CDD:381483 19/51 (37%)
ORANGE 106..141 CDD:128787 11/38 (29%)

Return to query results.
Submit another query.