DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m5-HLH and Hes6

DIOPT Version :10

Sequence 1:NP_524511.1 Gene:E(spl)m5-HLH / 43158 FlyBaseID:FBgn0002631 Length:178 Species:Drosophila melanogaster
Sequence 2:XP_063123388.1 Gene:Hes6 / 316626 RGDID:1312047 Length:234 Species:Rattus norvegicus


Alignment Length:211 Identity:53/211 - (25%)
Similarity:90/211 - (42%) Gaps:55/211 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TQHYLKVKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAILRMDKAEMLE-------AALVFMRK 72
            :..:.:.:|||:|::||||:|:.|..|:.|:|   |.:...:::.||:||       .||....:
  Rat    32 SSRFPQARKPLVEKKRRARINESLQELRLLLA---GTEVQAKLENAEVLELTVRRVQGALRGRAR 93

  Fly    73 QVVKQQAPVSPLPMDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHL--------GVEFQRM 129
            :..:.||..|    :.|..||:..:.|:...::...|:...|...::.||        |..|:.:
  Rat    94 EREQLQAEAS----ERFAAGYIQCMHEVHTFVSTCQAIDATVSAELLNHLLESMPLREGSSFRDL 154

  Fly   130 LQADQVQ----TSVTTSTP---RPLSPASS------GYHSDNEDSQSAASPK-PVE--------- 171
            | .|.:.    .|..:|.|   .|.||.||      ...||.|:...|...: |.|         
  Rat   155 L-GDSLAGLPGGSGRSSWPPGGSPESPLSSPPGPGDDLCSDLEEIPEAELNRVPAEGPDLVPTSL 218

  Fly   172 ---------ETMWRPW 178
                     :::||||
  Rat   219 GILTTARRAQSVWRPW 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m5-HLHNP_524511.1 bHLH-O_ESM5_like 20..78 CDD:381486 20/64 (31%)
ORANGE 87..131 CDD:128787 10/51 (20%)
Hes6XP_063123388.1 None

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