DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m5-HLH and her4.5

DIOPT Version :10

Sequence 1:NP_524511.1 Gene:E(spl)m5-HLH / 43158 FlyBaseID:FBgn0002631 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_571165.3 Gene:her4.5 / 30301 ZFINID:ZDB-GENE-081031-106 Length:152 Species:Danio rerio


Alignment Length:184 Identity:54/184 - (29%)
Similarity:79/184 - (42%) Gaps:38/184 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAPQSNNSTTFVSKTQHYL--KVKKPLLERQRRARMNKCLDTLKTLVA-EFQGDDAILRMDKAEM 62
            |||....|   :|..:..|  |::||::|:.||.|:|..::.||||:| ||.......|.:||::
Zfish     1 MAPTITGS---ISSRETLLTNKLRKPMVEKIRRERINSSIEKLKTLLAQEFVKQQPDSRQEKADI 62

  Fly    63 LEAALVFMRKQVVKQQAPVSPLPMDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQ 127
            ||..|.|:|:......|.      |........|||.:|:....|.:      .|.:..|.:..|
Zfish    63 LEMTLDFLRRSQKSSAAG------DGRSRCVQEAVSFLSQCPVQTQS------HTRLMKLFLHMQ 115

  Fly   128 RMLQADQ---VQTSVTTSTPRPLSPASSGYHSDNEDSQSAASPKPVEETMWRPW 178
              ..|||   |....||.|           |:::    ||....|....:||||
Zfish   116 --TPADQHTRVDNPQTTET-----------HANS----SAKQHTPAHSHIWRPW 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m5-HLHNP_524511.1 bHLH-O_ESM5_like 20..78 CDD:381486 23/58 (40%)
ORANGE 87..131 CDD:128787 9/43 (21%)
her4.5NP_571165.3 bHLH-O_HES5 19..77 CDD:381467 23/57 (40%)
ORANGE 77..123 CDD:128787 13/59 (22%)

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