DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m5-HLH and Helt

DIOPT Version :10

Sequence 1:NP_524511.1 Gene:E(spl)m5-HLH / 43158 FlyBaseID:FBgn0002631 Length:178 Species:Drosophila melanogaster
Sequence 2:XP_006509452.1 Gene:Helt / 234219 MGIID:3040955 Length:241 Species:Mus musculus


Alignment Length:177 Identity:39/177 - (22%)
Similarity:68/177 - (38%) Gaps:31/177 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VKKPLLERQRRARMNKCLDTLKTLVAEFQGDDAILRMDKAEMLEAALVFMRK------QVVKQQA 79
            |...::|::||.|:|:||:.|...|.......:..:::|||:||..:.::|.      ...:::|
Mouse    13 VSHKVIEKRRRDRINRCLNELGKTVPMALAKQSSGKLEKAEILEMTVQYLRALHSADFPRGREKA 77

  Fly    80 PVSPLPMDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQRMLQADQVQTSVTTSTP 144
            .:.....:.|..||...:..:...:.....|.....|.......::.:..|.|:  .|....|.|
Mouse    78 ELLAEFANYFHYGYHECMKNLVHYLTTVERMETKDTKYARILAFLQSKARLGAE--PTFPPLSLP 140

  Fly   145 RPLSPASSGYHSDNEDSQSAASPK-----PVEETMWR--------PW 178
            .|          |......||||:     |.|.||:.        ||
Mouse   141 EP----------DFSYQLHAASPEFPGHSPGEATMFPQGATPGSFPW 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m5-HLHNP_524511.1 bHLH-O_ESM5_like 20..78 CDD:381486 16/62 (26%)
ORANGE 87..131 CDD:128787 5/43 (12%)
HeltXP_006509452.1 bHLH-O_HELT 14..69 CDD:381414 15/54 (28%)
Hairy_orange 86..127 CDD:462193 5/40 (13%)
PLN02983 <147..>213 CDD:215533 10/31 (32%)

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